RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 NGRNQ9NPE2 291 aaKnown RBP18.62■□□□□ 0.57
TRAF4-201ENST00000262395 SIRPGQ9P1W8 387 aa18.62■□□□□ 0.57
TRAF4-201ENST00000262395 DNAJC16Q9Y2G8 782 aa18.62■□□□□ 0.57
TRAF4-201ENST00000262395 MAFBQ9Y5Q3 323 aaPredicted RBP18.62■□□□□ 0.57
TRAF4-201ENST00000262395 RGPD3A6NKT7 1758 aaPredicted RBP18.62■□□□□ 0.57
TRAF4-201ENST00000262395 RGPD4Q7Z3J3 1758 aa18.62■□□□□ 0.57
TRAF4-201ENST00000262395 A0A088AWK7 358 aa18.62■□□□□ 0.57
TRAF4-201ENST00000262395 F7P08709 466 aaPredicted RBP18.62■□□□□ 0.57
TRAF4-201ENST00000262395 HOXC6P09630 235 aa18.62■□□□□ 0.57
TRAF4-201ENST00000262395 CA9Q16790 459 aa18.62■□□□□ 0.57
TRAF4-201ENST00000262395 VWA5B1Q5TIE3 1220 aa18.62■□□□□ 0.57
TRAF4-201ENST00000262395 TRIM50Q86XT4 487 aa18.62■□□□□ 0.57
TRAF4-201ENST00000262395 STKLD1Q8NE28 680 aa18.62■□□□□ 0.57
TRAF4-201ENST00000262395 PPP1R16BQ96T49 567 aa18.62■□□□□ 0.57
TRAF4-201ENST00000262395 IL1RAPL1Q9NZN1 696 aa18.62■□□□□ 0.57
TRAF4-201ENST00000262395 SLC15A5A6NIM6 579 aa18.61■□□□□ 0.57
TRAF4-201ENST00000262395 CXCL8P10145 99 aa18.61■□□□□ 0.57
TRAF4-201ENST00000262395 ADORA2AP29274 412 aa18.61■□□□□ 0.57
TRAF4-201ENST00000262395 RNF111Q6ZNA4 994 aa18.61■□□□□ 0.57
TRAF4-201ENST00000262395 RASSF3Q86WH2 238 aa18.61■□□□□ 0.57
TRAF4-201ENST00000262395 ADGRF2Q8IZF7 708 aa18.61■□□□□ 0.57
TRAF4-201ENST00000262395 PLD5Q8N7P1 536 aa18.61■□□□□ 0.57
TRAF4-201ENST00000262395 ZNF778Q96MU6 729 aa18.61■□□□□ 0.57
TRAF4-201ENST00000262395 ELOVL4Q9GZR5 314 aa18.61■□□□□ 0.57
TRAF4-201ENST00000262395 XAB2Q9HCS7 855 aaKnown RBP18.61■□□□□ 0.57
TRAF4-201ENST00000262395 ETNK2Q9NVF9 386 aa18.61■□□□□ 0.57
TRAF4-201ENST00000262395 TRPC5Q9UL62 973 aaPredicted RBP18.61■□□□□ 0.57
TRAF4-201ENST00000262395 OGTO15294 1046 aa18.61■□□□□ 0.57
TRAF4-201ENST00000262395 CHADO15335 359 aa18.61■□□□□ 0.57
TRAF4-201ENST00000262395 OPHN1O60890 802 aa18.61■□□□□ 0.57
TRAF4-201ENST00000262395 APOEP02649 317 aa18.61■□□□□ 0.57
TRAF4-201ENST00000262395 BPGMP07738 259 aa18.61■□□□□ 0.57
TRAF4-201ENST00000262395 CYP4V2Q6ZWL3 525 aaPredicted RBP18.61■□□□□ 0.57
TRAF4-201ENST00000262395 DEPDC1BQ8WUY9 529 aa18.61■□□□□ 0.57
TRAF4-201ENST00000262395 HEXIM2Q96MH2 286 aaKnown RBP18.61■□□□□ 0.57
TRAF4-201ENST00000262395 PCYT2Q99447 389 aa18.61■□□□□ 0.57
TRAF4-201ENST00000262395 MRPL4Q9BYD3 311 aaKnown RBP18.61■□□□□ 0.57
TRAF4-201ENST00000262395 FRMD8P1Q9BZ68 369 aaPredicted RBP18.61■□□□□ 0.57
TRAF4-201ENST00000262395 COL4A5P29400 1685 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 F8W8V4 182 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 PRPSAP2O60256 369 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 RTN3O95197 1032 aaPredicted RBP18.6■□□□□ 0.57
TRAF4-201ENST00000262395 METTL18O95568 372 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 TNNC2P02585 160 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 PRKCBP05771 671 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 BCAR1P56945 870 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 HIC1Q14526 733 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 FASTKD1Q53R41 847 aaKnown RBP18.6■□□□□ 0.57
TRAF4-201ENST00000262395 SFT2D3Q587I9 215 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 BSPRYQ5W0U4 402 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 EEF1DP3Q658K8 133 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 XRRA1Q6P2D8 792 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 SLC4A11Q8NBS3 891 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 TRAPPC9Q96Q05 1148 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 ACO2Q99798 780 aaKnown RBP18.6■□□□□ 0.57
TRAF4-201ENST00000262395 ASNSD1Q9NWL6 643 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 ZNF214Q9UL59 606 aaPredicted RBP18.6■□□□□ 0.57
TRAF4-201ENST00000262395 TXNDC9O14530 226 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 TSHRP16473 764 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 ASPHQ12797 758 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 CNPY1Q3B7I2 92 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 ZNF667Q5HYK9 610 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 TCHHL1Q5QJ38 904 aaPredicted RBP18.6■□□□□ 0.57
TRAF4-201ENST00000262395 LGSNQ5TDP6 509 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 DPY19L2Q6NUT2 758 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 CASC4Q6P4E1 433 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 MTHFD1LQ6UB35 978 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 ATG14Q6ZNE5 492 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 TRAPPC12Q8WVT3 735 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 NLRP4Q96MN2 994 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 PGLYRP2Q96PD5 576 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 RNF157Q96PX1 679 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 PAK5Q9P286 719 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 PDP2Q9P2J9 529 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 CPSF3Q9UKF6 684 aaKnown RBP18.6■□□□□ 0.57
TRAF4-201ENST00000262395 AFG3L2Q9Y4W6 797 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 PPME1Q9Y570 386 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 KRT38O76015 456 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 PROCP04070 461 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 CPOXP36551 454 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 PNPOQ9NVS9 261 aa18.6■□□□□ 0.57
TRAF4-201ENST00000262395 INO80B-WBP1J3KQ70 363 aa18.59■□□□□ 0.57
TRAF4-201ENST00000262395 MED7O43513 233 aa18.59■□□□□ 0.57
TRAF4-201ENST00000262395 NFICP08651 508 aa18.59■□□□□ 0.57
TRAF4-201ENST00000262395 PTPN11Q06124 597 aaPredicted RBP18.59■□□□□ 0.57
TRAF4-201ENST00000262395 LAMB3Q13751 1172 aa18.59■□□□□ 0.57
TRAF4-201ENST00000262395 DNAL1Q4LDG9 190 aa18.59■□□□□ 0.57
TRAF4-201ENST00000262395 APLFQ8IW19 511 aaPredicted RBP18.59■□□□□ 0.57
TRAF4-201ENST00000262395 FNIP1Q8TF40 1166 aa18.59■□□□□ 0.57
TRAF4-201ENST00000262395 ANKRD36BP1Q96IX9 119 aa18.59■□□□□ 0.57
TRAF4-201ENST00000262395 CDHR1Q96JP9 859 aa18.59■□□□□ 0.57
TRAF4-201ENST00000262395 INO80BQ9C086 356 aaPredicted RBP18.59■□□□□ 0.57
TRAF4-201ENST00000262395 ADAMTS6Q9UKP5 1117 aa18.59■□□□□ 0.57
TRAF4-201ENST00000262395 SDR42E2A6NKP2 422 aa18.59■□□□□ 0.57
TRAF4-201ENST00000262395 BUD23O43709 281 aaKnown RBP18.59■□□□□ 0.57
TRAF4-201ENST00000262395 SPAG6O75602 509 aa18.59■□□□□ 0.57
TRAF4-201ENST00000262395 ITGB3P05106 788 aa18.59■□□□□ 0.57
TRAF4-201ENST00000262395 NCF2P19878 526 aaPredicted RBP18.59■□□□□ 0.57
TRAF4-201ENST00000262395 ABCD1P33897 745 aa18.59■□□□□ 0.57
TRAF4-201ENST00000262395 PRKG1Q13976 671 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms