RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 WDR78Q5VTH9 848 aa18.09■□□□□ 0.49
TRAM1-201ENST00000262213 TMEM192Q8IY95 271 aa18.09■□□□□ 0.49
TRAM1-201ENST00000262213 RNF149Q8NC42 400 aa18.09■□□□□ 0.49
TRAM1-201ENST00000262213 STKLD1Q8NE28 680 aa18.09■□□□□ 0.49
TRAM1-201ENST00000262213 DEPDC1BQ8WUY9 529 aa18.09■□□□□ 0.49
TRAM1-201ENST00000262213 RXFP2Q8WXD0 754 aa18.09■□□□□ 0.49
TRAM1-201ENST00000262213 MRPL4Q9BYD3 311 aaKnown RBP18.09■□□□□ 0.49
TRAM1-201ENST00000262213 NGRNQ9NPE2 291 aaKnown RBP18.09■□□□□ 0.49
TRAM1-201ENST00000262213 ETNK2Q9NVF9 386 aa18.09■□□□□ 0.49
TRAM1-201ENST00000262213 PAK5Q9P286 719 aa18.09■□□□□ 0.49
TRAM1-201ENST00000262213 TXNDC9O14530 226 aa18.08■□□□□ 0.49
TRAM1-201ENST00000262213 PRPSAP2O60256 369 aa18.08■□□□□ 0.49
TRAM1-201ENST00000262213 FAM189A1O60320 539 aa18.08■□□□□ 0.49
TRAM1-201ENST00000262213 GJB1P08034 283 aa18.08■□□□□ 0.49
TRAM1-201ENST00000262213 GMPRP36959 345 aa18.08■□□□□ 0.49
TRAM1-201ENST00000262213 FASTKD1Q53R41 847 aaKnown RBP18.08■□□□□ 0.49
TRAM1-201ENST00000262213 TRNP1Q6NT89 227 aa18.08■□□□□ 0.49
TRAM1-201ENST00000262213 CDHR1Q96JP9 859 aa18.08■□□□□ 0.49
TRAM1-201ENST00000262213 NR1H4Q96RI1 486 aaPredicted RBP18.08■□□□□ 0.49
TRAM1-201ENST00000262213 PPME1Q9Y570 386 aa18.08■□□□□ 0.49
TRAM1-201ENST00000262213 MAFBQ9Y5Q3 323 aaPredicted RBP18.08■□□□□ 0.49
TRAM1-201ENST00000262213 A0A088AWK7 358 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 LOC100653049A0A140TA62 436 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 HMX2A2RU54 273 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 OGTO15294 1046 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 ZMPSTE24O75844 475 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 KRT34O76011 436 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 RTN3O95197 1032 aaPredicted RBP18.08■□□□□ 0.48
TRAM1-201ENST00000262213 EGFRP00533 1210 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 IL1BP01584 269 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 PRKCBP05771 671 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 HOXC6P09630 235 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 RGS7P49802 495 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 HMGCS2P54868 508 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 BCAR1P56945 870 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 ASPHQ12797 758 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 GSTA3Q16772 222 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 CNPY1Q3B7I2 92 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 ZNF667Q5HYK9 610 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 FAM91A1Q658Y4 838 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 EEPD1Q7L9B9 569 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 PLD5Q8N7P1 536 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 FNIP1Q8TF40 1166 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 HEXIM2Q96MH2 286 aaKnown RBP18.08■□□□□ 0.48
TRAM1-201ENST00000262213 KLC2Q9H0B6 622 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 SLC15A5A6NIM6 579 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 MSCO60682 206 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 AP3M2P53677 418 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 CRADDP78560 199 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 CNTN2Q02246 1040 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 CASC4Q6P4E1 433 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 ZFAND2BQ8WV99 257 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 ANKRD36BP1Q96IX9 119 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 DDX43Q9NXZ2 648 aaKnown RBP18.08■□□□□ 0.48
TRAM1-201ENST00000262213 SOX13Q9UN79 622 aa18.08■□□□□ 0.48
TRAM1-201ENST00000262213 B4GALT5O43286 388 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 SERPINA6P08185 405 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 CXCL8P10145 99 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 TFDP2Q14188 446 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 TMEM132BQ14DG7 1078 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 SFT2D3Q587I9 215 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 EFHC1Q5JVL4 640 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 TCHHL1Q5QJ38 904 aaPredicted RBP18.07■□□□□ 0.48
TRAM1-201ENST00000262213 ADGRF2Q8IZF7 708 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 RNF157Q96PX1 679 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 ACO2Q99798 780 aaKnown RBP18.07■□□□□ 0.48
TRAM1-201ENST00000262213 ELOVL4Q9GZR5 314 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 TMEM134Q9H6X4 195 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 STK10O94804 968 aaKnown RBP18.07■□□□□ 0.48
TRAM1-201ENST00000262213 GPD1P21695 349 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 SERPINB6P35237 376 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 VWA5B1Q5TIE3 1220 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 BSPRYQ5W0U4 402 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 SLC4A11Q8NBS3 891 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 ZNF778Q96MU6 729 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 LHX5Q9H2C1 402 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 S100A14Q9HCY8 104 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 PNPLA8Q9NP80 782 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 CPSF3Q9UKF6 684 aaKnown RBP18.07■□□□□ 0.48
TRAM1-201ENST00000262213 PACSIN3Q9UKS6 424 aa18.07■□□□□ 0.48
TRAM1-201ENST00000262213 MYO18AQ92614 2054 aaKnown RBP18.06■□□□□ 0.48
TRAM1-201ENST00000262213 SDR42E2A6NKP2 422 aa18.06■□□□□ 0.48
TRAM1-201ENST00000262213 METTL18O95568 372 aa18.06■□□□□ 0.48
TRAM1-201ENST00000262213 PROCP04070 461 aa18.06■□□□□ 0.48
TRAM1-201ENST00000262213 NCF2P19878 526 aaPredicted RBP18.06■□□□□ 0.48
TRAM1-201ENST00000262213 CRABP2P29373 138 aa18.06■□□□□ 0.48
TRAM1-201ENST00000262213 RPS6KA3P51812 740 aa18.06■□□□□ 0.48
TRAM1-201ENST00000262213 PTPN11Q06124 597 aaPredicted RBP18.06■□□□□ 0.48
TRAM1-201ENST00000262213 CA9Q16790 459 aa18.06■□□□□ 0.48
TRAM1-201ENST00000262213 FKBP1CQ5VVH2 108 aa18.06■□□□□ 0.48
TRAM1-201ENST00000262213 OR6Y1Q8NGX8 325 aa18.06■□□□□ 0.48
TRAM1-201ENST00000262213 GORASP1Q9BQQ3 440 aa18.06■□□□□ 0.48
TRAM1-201ENST00000262213 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.06■□□□□ 0.48
TRAM1-201ENST00000262213 KLHL33A6NCF5 533 aa18.06■□□□□ 0.48
TRAM1-201ENST00000262213 APOL1O14791 398 aa18.06■□□□□ 0.48
TRAM1-201ENST00000262213 BUD23O43709 281 aaKnown RBP18.06■□□□□ 0.48
TRAM1-201ENST00000262213 SNNO75324 88 aaPredicted RBP18.06■□□□□ 0.48
TRAM1-201ENST00000262213 PRKCHP24723 683 aa18.06■□□□□ 0.48
TRAM1-201ENST00000262213 ADORA2AP29274 412 aa18.06■□□□□ 0.48
TRAM1-201ENST00000262213 CPOXP36551 454 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms