RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 SOX11P35716 441 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 SLC26A2P50443 739 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 MAXP61244 160 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 ABI1Q8IZP0 508 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 SLC25A41Q8N5S1 370 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 GIPC2Q8TF65 315 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 EXT2Q93063 718 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 ART4Q93070 314 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 PCED1BQ96HM7 432 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 SH3GL2Q99962 352 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 LRRC19Q9H756 370 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 ETNK1Q9HBU6 452 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 FAM105AQ9NUU6 356 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 CPSF2Q9P2I0 782 aaKnown RBP9.45□□□□□ -0.9
CKAP2-201ENST00000258607 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.45□□□□□ -0.9
CKAP2-201ENST00000258607 NRCAMQ92823 1304 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 MAPK13O15264 365 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 METTL18O95568 372 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 ITIH2P19823 946 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 GLRBP48167 497 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 FNTAP49354 379 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 PGFP49763 221 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 CPT1AP50416 773 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 HDAC4P56524 1084 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 TMPRSS15P98073 1019 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 NOMO1Q15155 1222 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 NOMO2Q5JPE7 1267 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 IQSEC1Q6DN90 963 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 LVRNQ6Q4G3 990 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 KDM7AQ6ZMT4 941 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 VSIG1Q86XK7 387 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 IFNL1Q8IU54 200 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 KATNAL2Q8IYT4 538 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 KCNV2Q8TDN2 545 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 PDCD6IPQ8WUM4 868 aaKnown RBP9.44□□□□□ -0.9
CKAP2-201ENST00000258607 CPT1BQ92523 772 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 CHMP6Q96FZ7 201 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 CNPY3Q9BT09 278 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 PITPNM3Q9BZ71 974 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 AVENQ9NQS1 362 aaPredicted RBP9.44□□□□□ -0.9
CKAP2-201ENST00000258607 UBQLN1Q9UMX0 589 aaKnown RBP9.44□□□□□ -0.9
CKAP2-201ENST00000258607 ARL5CA6NH57 179 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 MGEA5O60502 916 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 GPR32O75388 356 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 RPSAP08865 295 aaKnown RBP9.44□□□□□ -0.9
CKAP2-201ENST00000258607 PYGBP11216 843 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 HSPA6P17066 643 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 ANXA13P27216 316 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 CNGA2Q16280 664 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 TIGD5Q53EQ6 642 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 C6orf118Q5T5N4 469 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 ERMARDQ5T6L9 678 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 TAOK1Q7L7X3 1001 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 ZNF280BQ86YH2 543 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 RASAL3Q86YV0 1011 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 MAP7D3Q8IWC1 876 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 PLCD3Q8N3E9 789 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 PABPC5Q96DU9 382 aaKnown RBP9.44□□□□□ -0.9
CKAP2-201ENST00000258607 FAM193BQ96PV7 902 aaPredicted RBP9.44□□□□□ -0.9
CKAP2-201ENST00000258607 PAFAH2Q99487 392 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 SYT15Q9BQS2 421 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 VPS11Q9H270 941 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 ASB7Q9H672 318 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 SMPD4Q9NXE4 827 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 DNAJB4Q9UDY4 337 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 ZC3H7BQ9UGR2 993 aaKnown RBP9.44□□□□□ -0.9
CKAP2-201ENST00000258607 DOCK1Q14185 1865 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 WDR27A2RRH5 827 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 PTGESO14684 152 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 MT-CO1P00395 513 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 CPB1P15086 417 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 PTPN1P18031 435 aaKnown RBP9.44□□□□□ -0.9
CKAP2-201ENST00000258607 SLC25A11Q02978 314 aaKnown RBP9.44□□□□□ -0.9
CKAP2-201ENST00000258607 FAAP100Q0VG06 881 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 SLC10A2Q12908 348 aaPredicted RBP9.44□□□□□ -0.9
CKAP2-201ENST00000258607 DPYSL3Q14195 570 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 FBXO48Q5FWF7 155 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 KIAA0319Q5VV43 1072 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 FUKQ8N0W3 1084 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 HIPK4Q8NE63 616 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 EXOC2Q96KP1 924 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 ADAM7Q9H2U9 754 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 HOMER3Q9NSC5 361 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 TXNDC16Q9P2K2 825 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 PACSIN3Q9UKS6 424 aa9.44□□□□□ -0.9
CKAP2-201ENST00000258607 CXorf49A8MYA2 514 aaPredicted RBP9.43□□□□□ -0.9
CKAP2-201ENST00000258607 TRIM49D1C9J1S8 452 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 DNALI1O14645 258 aaPredicted RBP9.43□□□□□ -0.9
CKAP2-201ENST00000258607 MFSD11O43934 449 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 JCHAINP01591 159 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 PIGRP01833 764 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 PFKMP08237 780 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 FAM200BP0CF97 657 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 ZNF865P0CJ78 1059 aaPredicted RBP9.43□□□□□ -0.9
CKAP2-201ENST00000258607 ERVK-10P10266 1014 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 AKR1A1P14550 325 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 IVDP26440 423 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 RDXP35241 583 aaKnown RBP9.43□□□□□ -0.9
CKAP2-201ENST00000258607 ARL4CP56559 192 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 PDE1BQ01064 536 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms