RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 FAM124BQ9H5Z6 455 aaPredicted RBP17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 MTMR10Q9NXD2 777 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 SLC5A4Q9NY91 659 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 AP4E1Q9UPM8 1137 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 IKBKGQ9Y6K9 419 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 SMIM28A0A1B0GU29 152 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 UGT1A9O60656 530 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 LPXNO60711 386 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 INHBAP08476 426 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 PYGBP11216 843 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 TARSP26639 723 aaKnown RBP17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 TKTP29401 623 aaKnown RBP17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 GNL1P36915 607 aaPredicted RBP17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 GTF2A2P52657 109 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 BST2Q10589 180 aaKnown RBP17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 PLEKHG4Q58EX7 1191 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 ARHGAP17Q68EM7 881 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 PPM1NQ8N819 430 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 TMEM237Q96Q45 408 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 C11orf84Q9BUA3 381 aaPredicted RBP17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 UGT1A7Q9HAW7 530 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 UGT1A10Q9HAW8 530 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 UGT1A8Q9HAW9 530 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 ARHGEF3Q9NR81 526 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 TMPRSS4Q9NRS4 437 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 ZC3H7BQ9UGR2 993 aaKnown RBP17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 USH1CQ9Y6N9 552 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 NUMBLQ9Y6R0 609 aa17.17■□□□□ 0.34
UBQLN1-201ENST00000257468 KPNA7A9QM74 516 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 IGFBP6P24592 240 aaPredicted RBP17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 GRIA1P42261 906 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 CCDC15Q0P6D6 951 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 PLEKHH3Q7Z736 793 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 UNC93AQ86WB7 457 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 MPP5Q8N3R9 675 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 USP6NLQ92738 828 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 FAM111AQ96PZ2 611 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 PTPN18Q99952 460 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 KLC2Q9H0B6 622 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 CYLDQ9NQC7 956 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 SMYD2Q9NRG4 433 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 DCTN4Q9UJW0 460 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 TRIP12Q14669 1992 aaPredicted RBP17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 IQANK1A0A1B0GTG1 560 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 RRN3P2A6NIE6 340 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 A6NJR5 290 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 PIRO00625 290 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 UNC5CO95185 931 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 CCNB1P14635 433 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 TSHRP16473 764 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 BCAT1P54687 386 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 PITX1P78337 314 aaPredicted RBP17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 DPYSL2Q16555 572 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 IQSEC1Q6DN90 963 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 SLC26A9Q7LBE3 791 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 VSIG1Q86XK7 387 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 ANKRD52Q8NB46 1076 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 RFWD2Q8NHY2 731 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 LRRC37BQ96QE4 947 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 CACNG4Q9UBN1 327 aa17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 UBQLN1Q9UMX0 589 aaKnown RBP17.16■□□□□ 0.34
UBQLN1-201ENST00000257468 PDCD11Q14690 1871 aaKnown RBP17.15■□□□□ 0.34
UBQLN1-201ENST00000257468 SYNJ2BP-COX16A0A087WUM0 186 aa17.15■□□□□ 0.34
UBQLN1-201ENST00000257468 TM9SF1O15321 606 aa17.15■□□□□ 0.34
UBQLN1-201ENST00000257468 TREHO43280 583 aa17.15■□□□□ 0.34
UBQLN1-201ENST00000257468 F2P00734 622 aa17.15■□□□□ 0.34
UBQLN1-201ENST00000257468 GOT1P17174 413 aa17.15■□□□□ 0.34
UBQLN1-201ENST00000257468 AMPD1P23109 780 aa17.15■□□□□ 0.34
UBQLN1-201ENST00000257468 PTPN9P43378 593 aa17.15■□□□□ 0.34
UBQLN1-201ENST00000257468 KCNT2Q6UVM3 1135 aa17.15■□□□□ 0.34
UBQLN1-201ENST00000257468 SH2D5Q6ZV89 423 aa17.15■□□□□ 0.34
UBQLN1-201ENST00000257468 ZNF534Q76KX8 674 aa17.15■□□□□ 0.34
UBQLN1-201ENST00000257468 LRRC6Q86X45 466 aa17.15■□□□□ 0.34
UBQLN1-201ENST00000257468 FAM131BQ86XD5 332 aa17.15■□□□□ 0.34
UBQLN1-201ENST00000257468 ARRDC4Q8NCT1 418 aa17.15■□□□□ 0.34
UBQLN1-201ENST00000257468 STK32AQ8WU08 396 aa17.15■□□□□ 0.34
UBQLN1-201ENST00000257468 TTC17Q96AE7 1141 aa17.15■□□□□ 0.34
UBQLN1-201ENST00000257468 CSPG4P5Q96PW8 444 aa17.15■□□□□ 0.34
UBQLN1-201ENST00000257468 COX16Q9P0S2 106 aa17.15■□□□□ 0.34
UBQLN1-201ENST00000257468 HAO1Q9UJM8 370 aa17.15■□□□□ 0.34
UBQLN1-201ENST00000257468 NRCAMQ92823 1304 aa17.14■□□□□ 0.34
UBQLN1-201ENST00000257468 CFAP69A5D8W1 941 aa17.14■□□□□ 0.33
UBQLN1-201ENST00000257468 TRIM49D1C9J1S8 452 aa17.14■□□□□ 0.33
UBQLN1-201ENST00000257468 CLDN5O00501 218 aa17.14■□□□□ 0.33
UBQLN1-201ENST00000257468 NEK3P51956 506 aa17.14■□□□□ 0.33
UBQLN1-201ENST00000257468 RABGGTBP53611 331 aa17.14■□□□□ 0.33
UBQLN1-201ENST00000257468 BMPR2Q13873 1038 aa17.14■□□□□ 0.33
UBQLN1-201ENST00000257468 SNX17Q15036 470 aa17.14■□□□□ 0.33
UBQLN1-201ENST00000257468 SETDB1Q15047 1291 aa17.14■□□□□ 0.33
UBQLN1-201ENST00000257468 ZNF449Q6P9G9 518 aa17.14■□□□□ 0.33
UBQLN1-201ENST00000257468 CDHR3Q6ZTQ4 885 aa17.14■□□□□ 0.33
UBQLN1-201ENST00000257468 ANKRD23Q86SG2 305 aa17.14■□□□□ 0.33
UBQLN1-201ENST00000257468 CENPIQ92674 756 aaPredicted RBP17.14■□□□□ 0.33
UBQLN1-201ENST00000257468 APOPT1Q96IL0 206 aa17.14■□□□□ 0.33
UBQLN1-201ENST00000257468 SNX25Q9H3E2 840 aa17.14■□□□□ 0.33
UBQLN1-201ENST00000257468 MANSC1Q9H8J5 431 aa17.14■□□□□ 0.33
UBQLN1-201ENST00000257468 KANSL3Q9P2N6 904 aa17.14■□□□□ 0.33
UBQLN1-201ENST00000257468 ZNF638Q14966 1978 aaKnown RBP17.14■□□□□ 0.33
UBQLN1-201ENST00000257468 SLC15A5A6NIM6 579 aa17.14■□□□□ 0.33
UBQLN1-201ENST00000257468 ACAT1P24752 427 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms