RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 VWA5AO00534 786 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 WNT10BO00744 389 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 WDR46O15213 610 aaKnown RBP12.4□□□□□ -0.42
USHBP1-201ENST00000252597 AHCYL1O43865 530 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 OATP04181 439 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 MLH1P40692 756 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 STAT5BP51692 787 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 PKNOX1P55347 436 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 YWHAEP62258 255 aaKnown RBP12.4□□□□□ -0.42
USHBP1-201ENST00000252597 COG7P83436 770 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 TDRPQ86YL5 185 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 ZBTB8OSQ8IWT0 167 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 B4GALNT2Q8NHY0 566 aa12.4□□□□□ -0.42
USHBP1-201ENST00000252597 ENO3P13929 434 aaPredicted RBP12.39□□□□□ -0.43
USHBP1-201ENST00000252597 GLRBP48167 497 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 ROR2Q01974 943 aaKnown RBP12.39□□□□□ -0.43
USHBP1-201ENST00000252597 LY6KQ17RY6 165 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 LRRC23Q53EV4 343 aaPredicted RBP12.39□□□□□ -0.43
USHBP1-201ENST00000252597 BBS12Q6ZW61 710 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 KDELC2Q7Z4H8 507 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 NIM1KQ8IY84 436 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 SLC44A1Q8WWI5 657 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 ECSITQ9BQ95 431 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 CAPN8A6NHC0 703 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 ATP9BO43861 1147 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 CREB3O43889 395 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 RNASEH1O60930 286 aaKnown RBP12.39□□□□□ -0.43
USHBP1-201ENST00000252597 ASS1P00966 412 aaKnown RBP12.39□□□□□ -0.43
USHBP1-201ENST00000252597 PYGLP06737 847 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 PDGFRBP09619 1106 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 LCP1P13796 627 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 RAG1P15918 1043 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 RAB27AP51159 221 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 TGFB2P61812 414 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 GBE1Q04446 702 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 CDC16Q13042 620 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 CA9Q16790 459 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 FOXB2Q5VYV0 432 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 ENDOVQ8N8Q3 282 aaKnown RBP12.39□□□□□ -0.43
USHBP1-201ENST00000252597 RAB3IL1Q8TBN0 382 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 GDPD5Q8WTR4 605 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 AZIN2Q96A70 460 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 VCPIP1Q96JH7 1222 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 ASNSD1Q9NWL6 643 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 STRIP2Q9ULQ0 834 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 HSPA4LO95757 839 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 MT-CO1P00395 513 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 SUPT20HL2P0C7V6 817 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 ADORA2BP29275 332 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 AQP4P55087 323 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 SNRPFP62306 86 aaKnown RBP12.39□□□□□ -0.43
USHBP1-201ENST00000252597 YWHAZP63104 245 aaKnown RBP12.39□□□□□ -0.43
USHBP1-201ENST00000252597 TMEM62Q0P6H9 643 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 SUPT20HL1Q3ZLR7 823 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 GLRA4Q5JXX5 417 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 ZBTB46Q86UZ6 589 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 SPNS2Q8IVW8 549 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 DNAAF3Q8N9W5 541 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 STKLD1Q8NE28 680 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 FAM172AQ8WUF8 416 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 SNRNP27Q8WVK2 155 aaKnown RBP12.39□□□□□ -0.43
USHBP1-201ENST00000252597 SKA1Q96BD8 255 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 CPB2Q96IY4 423 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 TIPINQ9BVW5 301 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 MRPL4Q9BYD3 311 aaKnown RBP12.39□□□□□ -0.43
USHBP1-201ENST00000252597 ST6GALNAC4Q9H4F1 302 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 RPF1Q9H9Y2 349 aaKnown RBP12.39□□□□□ -0.43
USHBP1-201ENST00000252597 ANLNQ9NQW6 1124 aa12.39□□□□□ -0.43
USHBP1-201ENST00000252597 E7ENQ6 273 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 H0YCG3 227 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 APOC4-APOC2K7ER74 178 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 RGS20O76081 388 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 MICAL2O94851 1124 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 APOC2P02655 101 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 FESP07332 822 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 NFICP08651 508 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 ERVK-10P10266 1014 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 KCNA2P16389 499 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 ADORA2AP29274 412 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 ACAP1Q15027 740 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 EFHC1Q5JVL4 640 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 DPY19L2Q6NUT2 758 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 SATL1Q86VE3 508 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 MAP7D3Q8IWC1 876 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 ATP2A3Q93084 1043 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 SGF29Q96ES7 293 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 SCYL1Q96KG9 808 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 PEBP4Q96S96 227 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 CENPKQ9BS16 269 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 NRBP2Q9NSY0 501 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 FARP1Q9Y4F1 1045 aaPredicted RBP12.38□□□□□ -0.43
USHBP1-201ENST00000252597 KIF3CO14782 793 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 APOL1O14791 398 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 PFDN1O60925 122 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 COPAP53621 1224 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 DLG1Q12959 904 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 UNC5AQ6ZN44 842 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 ACOT1Q86TX2 421 aa12.38□□□□□ -0.43
USHBP1-201ENST00000252597 NDRG1Q92597 394 aaKnown RBP12.38□□□□□ -0.43
USHBP1-201ENST00000252597 UBP1Q9NZI7 540 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms