RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 BAATQ14032 418 aaPredicted RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 MMEL1Q495T6 779 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 EFHC1Q5JVL4 640 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 MTHFD1LQ6UB35 978 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 C3orf62Q6ZUJ4 267 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 LRRC6Q86X45 466 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 ALLCQ8N6M5 410 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 C2orf69Q8N8R5 385 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 ZBTB10Q96DT7 871 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 MCRS1Q96EZ8 462 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 NRBF2Q96F24 287 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 OXNAD1Q96HP4 312 aaPredicted RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 PPP1R2P1Q96PQ5 205 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 SLITRK1Q96PX8 696 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 AS3MTQ9HBK9 375 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 PLK2Q9NYY3 685 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 ATXN10Q9UBB4 475 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 DCTN4Q9UJW0 460 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 LRFN2Q9ULH4 789 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 HMX2A2RU54 273 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 GAS2O43903 313 aaKnown RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 PRPSAP2O60256 369 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 ADCY3O60266 1144 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 RTN3O95197 1032 aaPredicted RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 ESRRBO95718 433 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 T-ENOLP0DO92 83 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 OSBPP22059 807 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 HADHAP40939 763 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 COPAP53621 1224 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 PRKCEQ02156 737 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 SFSWAPQ12872 951 aaKnown RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 THOC5Q13769 683 aaKnown RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 MAPK6Q16659 721 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 ACCSLQ4AC99 568 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 SPOCD1Q6ZMY3 1216 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 MARK2Q7KZI7 788 aaKnown RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 RHPN2Q8IUC4 686 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 HACE1Q8IYU2 909 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 CEP170P1Q96L14 293 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 C7orf26Q96N11 449 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 PAFAH2Q99487 392 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 GPR20Q99678 358 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 ACO2Q99798 780 aaKnown RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 TMEM120AQ9BXJ8 343 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 UPF3AQ9H1J1 476 aaKnown RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 MLXIPLQ9NP71 852 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 DCDC2Q9UHG0 476 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 ARHGAP26Q9UNA1 814 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 NEU3Q9UQ49 428 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 C2CD2Q9Y426 696 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 OBSL1O75147 1896 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 A6NHS1 94 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 C19orf81C9J6K1 198 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 CLASP2O75122 1294 aaKnown RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 CPA3P15088 417 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 CD19P15391 556 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 IL1R2P27930 398 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 TTKP33981 857 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 SERPINB8P50452 374 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 CDK7P50613 346 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 NOP14P78316 857 aaKnown RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 WASHC5Q12768 1159 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 PDK2Q15119 407 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 TREML2Q5T2D2 321 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 ARHGEF16Q5VV41 709 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 MTDHQ86UE4 582 aaKnown RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 TMEM126BQ8IUX1 230 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 NAT8LQ8N9F0 302 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 ZNF280CQ8ND82 737 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 CMASQ8NFW8 434 aaPredicted RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 DEPDC1BQ8WUY9 529 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 SLC7A3Q8WY07 619 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 CENPIQ92674 756 aaPredicted RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 ASCC2Q9H1I8 757 aaPredicted RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 TIMMDC1Q9NPL8 285 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 C8orf4Q9NR00 106 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 ARHGEF4Q9NR80 690 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 SLC9A2Q9UBY0 812 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 ZNF180Q9UJW8 692 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 hCG_1818297A0A087WSY0 165 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 PSMD3O43242 534 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 SP100P23497 879 aaPredicted RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 PSMC4P43686 418 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 EIF3EP60228 445 aaKnown RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 PDE1BQ01064 536 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 MBTD1Q05BQ5 628 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 SF3A3Q12874 501 aaKnown RBP eCLIP4.29□□□□□ -1.724e-6■■■■□ 22.2
UBE4A-201ENST00000252108 CUL2Q13617 745 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 TNFAIP1Q13829 316 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 C11orf91Q3C1V1 193 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 GRAMD1BQ3KR37 738 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 PLPPR4Q7Z2D5 763 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 CLNKQ7Z7G1 428 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 FAM81AQ8TBF8 368 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 MRRFQ96E11 262 aaKnown RBP4.29□□□□□ -1.72
UBE4A-201ENST00000252108 ZNF333Q96JL9 665 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 RMDN3Q96TC7 470 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 HEMGNQ9BXL5 484 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 PNPLA8Q9NP80 782 aa4.29□□□□□ -1.72
UBE4A-201ENST00000252108 THAP1Q9NVV9 213 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms