RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 CYP2F1P24903 491 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 ZNF268Q14587 947 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 TATDN1Q6P1N9 297 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 PPHLN1Q8NEY8 458 aaKnown RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 GCNAQ96QF7 691 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 FSD1LQ9BXM9 530 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 FRMD8P1Q9BZ68 369 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 RNPEPQ9H4A4 650 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 KIAA0100Q14667 2235 aaKnown RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 DYNC1LI2O43237 492 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 CHEK2O96017 543 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 GFAPP14136 432 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 IL10P22301 178 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 SLC1A6P48664 564 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 NOMO3P69849 1222 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 STILQ15468 1287 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 DDIT4Q9NX09 232 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 CHKBQ9Y259 395 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 IGLV3-22A0A075B6J6 115 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 E2F6O75461 281 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 PAMP19021 973 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 TNFSF9P41273 254 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 CCNHP51946 323 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 EEF1DP3Q658K8 133 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 SAMD3Q8N6K7 520 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 EFHBQ8N7U6 833 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 JOSD2Q8TAC2 188 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 PDCD6IPQ8WUM4 868 aaKnown RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 AFG1LQ8WV93 481 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 LENG9Q96B70 501 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 EFCAB1Q9HAE3 211 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 CYP3A43Q9HB55 503 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 DRG1Q9Y295 367 aaKnown RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 WASF2Q9Y6W5 498 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 PRR5-ARHGAP8B1AHC4 643 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 HBP1O60381 514 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 ARHGAP8P85298 464 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 GAD2Q05329 585 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 VCPIP1Q96JH7 1222 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 A0A087WZ62 844 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 ALOX15BO15296 676 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 SNX2O60749 519 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 AP1G2O75843 785 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 UNC5CO95185 931 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 FAM200BP0CF97 657 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 THRAP10827 490 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 CYP2C9P11712 490 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 HIRAP54198 1017 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 VSTM1Q6UX27 236 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 WDR49Q8IV35 697 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 ADAM32Q8TC27 787 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 PLEKHO2Q8TD55 490 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 FDXACB1Q9BRP7 624 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 ILKAPQ9H0C8 392 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 PORCNQ9H237 461 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 TMEM59LQ9UK28 342 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 ZMYM2Q9UBW7 1377 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 UBA6A0AVT1 1052 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 DCXO43602 365 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 ETS2P15036 469 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 MGAT5Q09328 741 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 FLOT2Q14254 428 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 INPP5AQ14642 412 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 ZSCAN18Q8TBC5 510 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 MBOAT7Q96N66 472 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 ZNF184Q99676 751 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 ETNK2Q9NVF9 386 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 PNPOQ9NVS9 261 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 LGALS13Q9UHV8 139 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 APPL1Q9UKG1 709 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 TMEM191CA6NGB0 347 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 RNF103O00237 685 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 ZNF862O60290 1169 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 NELFEP18615 380 aaKnown RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 FDFT1P37268 417 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 TGFB2P61812 414 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 THEMIS2Q5TEJ8 643 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 C4orf22Q6V702 233 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 INPP5DQ92835 1189 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 EME1Q96AY2 570 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 CNDP1Q96KN2 507 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 SP110Q9HB58 689 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 APOBEC3GQ9HC16 384 aaKnown RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 SARS2Q9NP81 518 aaKnown RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 SUN2Q9UH99 717 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 CORO1CQ9ULV4 474 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 PSMD3O43242 534 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 MMP8P22894 467 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 MSX2P35548 267 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 PLK1P53350 603 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 JAG1P78504 1218 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 C6orf89Q6UWU4 347 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 C16orf89Q6UX73 402 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 MARK4Q96L34 752 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 ZNF560Q96MR9 790 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 NKX1-2Q9UD57 310 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 WARS2Q9UGM6 360 aaKnown RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 KIAA1257Q9ULG3 409 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 SIPA1L3O60292 1781 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 ASTN2O75129 1339 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms