RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 ARCQ7LC44 396 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 FAM131BQ86XD5 332 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 VSIG1Q86XK7 387 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 GSTCDQ8NEC7 633 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 WNT8BQ93098 351 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 HNRNPABQ99729 332 aaKnown RBP22.51■■□□□ 1.19
CLN6-201ENST00000249806 DUSP16Q9BY84 665 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 NMRK2Q9NPI5 230 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 CYLDQ9NQC7 956 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 GGT7Q9UJ14 662 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 MFHAS1Q9Y4C4 1052 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 TEX264Q9Y6I9 313 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 CTSHP09668 335 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 AKR1A1P14550 325 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 PTPN1P18031 435 aaKnown RBP22.51■■□□□ 1.19
CLN6-201ENST00000249806 KRT4P19013 534 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 LRPAP1P30533 357 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 RABGGTBP53611 331 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 LACTB2Q53H82 288 aaPredicted RBP22.51■■□□□ 1.19
CLN6-201ENST00000249806 CSPG4P5Q96PW8 444 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 PPCSQ9HAB8 311 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 ETNK2Q9NVF9 386 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 GRID1Q9ULK0 1009 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 ST3GAL5Q9UNP4 418 aa22.51■■□□□ 1.19
CLN6-201ENST00000249806 KBTBD13C9JR72 458 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 CA4P22748 312 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 AMPD1P23109 780 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 SCNN1AP37088 669 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 MATKP42679 507 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 SCTRP47872 440 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 IL9RQ01113 521 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 DCAF6Q58WW2 860 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 TAF2Q6P1X5 1199 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 LPPQ93052 612 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 DHRS4Q9BTZ2 278 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 TSPYL2Q9H2G4 693 aaPredicted RBP22.5■■□□□ 1.19
CLN6-201ENST00000249806 ETNK1Q9HBU6 452 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 TMPRSS4Q9NRS4 437 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 USP15Q9Y4E8 981 aaPredicted RBP22.5■■□□□ 1.19
CLN6-201ENST00000249806 NR2E3Q9Y5X4 410 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 TYROBPO43914 113 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 PGK1P00558 417 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 APRTP07741 180 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 GOT1P17174 413 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 MLH1P40692 756 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 MRPS6P82932 125 aaKnown RBP22.5■■□□□ 1.19
CLN6-201ENST00000249806 SLC1A5Q15758 541 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 KLHL38Q2WGJ6 581 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 NBPF20Q3BBV1 942 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 EFHC1Q5JVL4 640 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 CGB2Q6NT52 195 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 DCAKDQ8WVC6 231 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 GAD1Q99259 594 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 ABCF3Q9NUQ8 709 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 SENP1Q9P0U3 644 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 FETUBQ9UGM5 382 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 TRPM7Q96QT4 1865 aa22.5■■□□□ 1.19
CLN6-201ENST00000249806 SYNJ2BP-COX16A0A087WUM0 186 aa22.49■■□□□ 1.19
CLN6-201ENST00000249806 TCRBV9S1A1TA0A576 114 aa22.49■■□□□ 1.19
CLN6-201ENST00000249806 CFAP69A5D8W1 941 aa22.49■■□□□ 1.19
CLN6-201ENST00000249806 MSH2P43246 934 aa22.49■■□□□ 1.19
CLN6-201ENST00000249806 MDH1BQ5I0G3 518 aa22.49■■□□□ 1.19
CLN6-201ENST00000249806 GDF6Q6KF10 455 aaPredicted RBP22.49■■□□□ 1.19
CLN6-201ENST00000249806 TRPM8Q7Z2W7 1104 aa22.49■■□□□ 1.19
CLN6-201ENST00000249806 SOCS4Q8WXH5 440 aa22.49■■□□□ 1.19
CLN6-201ENST00000249806 SPOCK2Q92563 424 aa22.49■■□□□ 1.19
CLN6-201ENST00000249806 ACTR5Q9H9F9 607 aaPredicted RBP22.49■■□□□ 1.19
CLN6-201ENST00000249806 MIOSQ9NXC5 875 aa22.49■■□□□ 1.19
CLN6-201ENST00000249806 COX16Q9P0S2 106 aa22.49■■□□□ 1.19
CLN6-201ENST00000249806 TIMM13Q9Y5L4 95 aaPredicted RBP22.49■■□□□ 1.19
CLN6-201ENST00000249806 DUSP11O75319 330 aaKnown RBP22.49■■□□□ 1.19
CLN6-201ENST00000249806 NPR3P17342 541 aa22.49■■□□□ 1.19
CLN6-201ENST00000249806 SULT1E1P49888 294 aa22.49■■□□□ 1.19
CLN6-201ENST00000249806 YWHAGP61981 247 aaKnown RBP eCLIP22.49■■□□□ 1.19
CLN6-201ENST00000249806 CRHR2Q13324 411 aa22.49■■□□□ 1.19
CLN6-201ENST00000249806 KCNT2Q6UVM3 1135 aa22.49■■□□□ 1.19
CLN6-201ENST00000249806 FAM47EQ6ZV65 393 aa22.49■■□□□ 1.19
CLN6-201ENST00000249806 STRADAQ7RTN6 431 aa22.49■■□□□ 1.19
CLN6-201ENST00000249806 NETO2Q8NC67 525 aa22.49■■□□□ 1.19
CLN6-201ENST00000249806 MZB1Q8WU39 189 aa22.49■■□□□ 1.19
CLN6-201ENST00000249806 FAM105AQ9NUU6 356 aa22.49■■□□□ 1.19
CLN6-201ENST00000249806 SMG5Q9UPR3 1016 aaKnown RBP22.49■■□□□ 1.19
CLN6-201ENST00000249806 ZNF638Q14966 1978 aaKnown RBP22.48■■□□□ 1.19
CLN6-201ENST00000249806 ZNF487B1APH4 448 aa22.48■■□□□ 1.19
CLN6-201ENST00000249806 GOLGA8RI6L899 631 aa22.48■■□□□ 1.19
CLN6-201ENST00000249806 GABRDO14764 452 aa22.48■■□□□ 1.19
CLN6-201ENST00000249806 METTL18O95568 372 aa22.48■■□□□ 1.19
CLN6-201ENST00000249806 ATP2A2P16615 1042 aaKnown RBP22.48■■□□□ 1.19
CLN6-201ENST00000249806 YWHAZP63104 245 aaKnown RBP22.48■■□□□ 1.19
CLN6-201ENST00000249806 SLC25A52Q3SY17 297 aa22.48■■□□□ 1.19
CLN6-201ENST00000249806 KBTBD12Q3ZCT8 623 aa22.48■■□□□ 1.19
CLN6-201ENST00000249806 CLEC20AQ6ZU45 233 aa22.48■■□□□ 1.19
CLN6-201ENST00000249806 CAND1Q86VP6 1230 aaKnown RBP22.48■■□□□ 1.19
CLN6-201ENST00000249806 SENP8Q96LD8 212 aa22.48■■□□□ 1.19
CLN6-201ENST00000249806 KLF6Q99612 283 aaPredicted RBP22.48■■□□□ 1.19
CLN6-201ENST00000249806 MED10Q9BTT4 135 aa22.48■■□□□ 1.19
CLN6-201ENST00000249806 DNAI2Q9GZS0 605 aa22.48■■□□□ 1.19
CLN6-201ENST00000249806 KLC2Q9H0B6 622 aa22.48■■□□□ 1.19
CLN6-201ENST00000249806 DDX43Q9NXZ2 648 aaKnown RBP22.48■■□□□ 1.19
CLN6-201ENST00000249806 GTF2IRD1Q9UHL9 959 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms