RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 DARSP14868 501 aaKnown RBP20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 MAGEA6P43360 314 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 BST2Q10589 180 aaKnown RBP20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 SETDB1Q15047 1291 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 PLEKHG4Q58EX7 1191 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 FBXO47Q5MNV8 452 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 IQSEC1Q6DN90 963 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 CEP57Q86XR8 500 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 ANKRD52Q8NB46 1076 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 TMEM40Q8WWA1 233 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 TRIM6Q9C030 488 aaPredicted RBP20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 VPS11Q9H270 941 aa20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 TRIP12Q14669 1992 aaPredicted RBP20.28■□□□□ 0.84
CDC42EP1-201ENST00000249014 A8MUI8 341 aa20.27■□□□□ 0.84
CDC42EP1-201ENST00000249014 CXorf49A8MYA2 514 aaPredicted RBP20.27■□□□□ 0.84
CDC42EP1-201ENST00000249014 DYNC1LI2O43237 492 aaPredicted RBP20.27■□□□□ 0.84
CDC42EP1-201ENST00000249014 METTL18O95568 372 aa20.27■□□□□ 0.84
CDC42EP1-201ENST00000249014 ALADP13716 330 aa20.27■□□□□ 0.84
CDC42EP1-201ENST00000249014 ETV4P43268 484 aa20.27■□□□□ 0.84
CDC42EP1-201ENST00000249014 NEK3P51956 506 aa20.27■□□□□ 0.84
CDC42EP1-201ENST00000249014 SLC18A2Q05940 514 aa20.27■□□□□ 0.84
CDC42EP1-201ENST00000249014 CCDC185Q8N715 623 aa20.27■□□□□ 0.84
CDC42EP1-201ENST00000249014 NPHS2Q9NP85 383 aa20.27■□□□□ 0.84
CDC42EP1-201ENST00000249014 ZC3H7BQ9UGR2 993 aaKnown RBP20.27■□□□□ 0.84
CDC42EP1-201ENST00000249014 UBQLN1Q9UMX0 589 aaKnown RBP20.27■□□□□ 0.84
CDC42EP1-201ENST00000249014 AP4E1Q9UPM8 1137 aa20.27■□□□□ 0.84
CDC42EP1-201ENST00000249014 STK38LQ9Y2H1 464 aa20.27■□□□□ 0.84
CDC42EP1-201ENST00000249014 ZNF638Q14966 1978 aaKnown RBP20.27■□□□□ 0.83
CDC42EP1-201ENST00000249014 SMIM28A0A1B0GU29 152 aa20.27■□□□□ 0.83
CDC42EP1-201ENST00000249014 ZNF487B1APH4 448 aa20.27■□□□□ 0.83
CDC42EP1-201ENST00000249014 PYGBP11216 843 aa20.27■□□□□ 0.83
CDC42EP1-201ENST00000249014 GNL1P36915 607 aaPredicted RBP20.27■□□□□ 0.83
CDC42EP1-201ENST00000249014 RPL34P49207 117 aaKnown RBP20.27■□□□□ 0.83
CDC42EP1-201ENST00000249014 GTF2A2P52657 109 aa20.27■□□□□ 0.83
CDC42EP1-201ENST00000249014 BCAT1P54687 386 aa20.27■□□□□ 0.83
CDC42EP1-201ENST00000249014 SNX16P57768 344 aa20.27■□□□□ 0.83
CDC42EP1-201ENST00000249014 E2F5Q15329 346 aa20.27■□□□□ 0.83
CDC42EP1-201ENST00000249014 PRAMEF19Q5SWL8 479 aa20.27■□□□□ 0.83
CDC42EP1-201ENST00000249014 CRYBG2Q8N1P7 616 aa20.27■□□□□ 0.83
CDC42EP1-201ENST00000249014 APOPT1Q96IL0 206 aa20.27■□□□□ 0.83
CDC42EP1-201ENST00000249014 KCTD15Q96SI1 283 aaPredicted RBP20.27■□□□□ 0.83
CDC42EP1-201ENST00000249014 TRIM56Q9BRZ2 755 aaKnown RBP20.27■□□□□ 0.83
CDC42EP1-201ENST00000249014 FRMD8Q9BZ67 464 aaPredicted RBP20.27■□□□□ 0.83
CDC42EP1-201ENST00000249014 RNF39Q9H2S5 420 aa20.27■□□□□ 0.83
CDC42EP1-201ENST00000249014 GOLGA2P5Q9HBQ8 144 aa20.27■□□□□ 0.83
CDC42EP1-201ENST00000249014 NRCAMQ92823 1304 aa20.26■□□□□ 0.83
CDC42EP1-201ENST00000249014 KPNA7A9QM74 516 aa20.26■□□□□ 0.83
CDC42EP1-201ENST00000249014 ECM2O94769 699 aaPredicted RBP20.26■□□□□ 0.83
CDC42EP1-201ENST00000249014 F2P00734 622 aa20.26■□□□□ 0.83
CDC42EP1-201ENST00000249014 DHRS4L1P0CG22 281 aa20.26■□□□□ 0.83
CDC42EP1-201ENST00000249014 CYP2C9P11712 490 aa20.26■□□□□ 0.83
CDC42EP1-201ENST00000249014 DESP17661 470 aa20.26■□□□□ 0.83
CDC42EP1-201ENST00000249014 OVGP1Q12889 678 aa20.26■□□□□ 0.83
CDC42EP1-201ENST00000249014 PREPLQ4J6C6 727 aaPredicted RBP20.26■□□□□ 0.83
CDC42EP1-201ENST00000249014 WLSQ5T9L3 541 aa20.26■□□□□ 0.83
CDC42EP1-201ENST00000249014 ZNF534Q76KX8 674 aa20.26■□□□□ 0.83
CDC42EP1-201ENST00000249014 SLC26A11Q86WA9 606 aa20.26■□□□□ 0.83
CDC42EP1-201ENST00000249014 PPM1NQ8N819 430 aa20.26■□□□□ 0.83
CDC42EP1-201ENST00000249014 TBC1D31Q96DN5 1066 aa20.26■□□□□ 0.83
CDC42EP1-201ENST00000249014 NCAPGQ9BPX3 1015 aa20.26■□□□□ 0.83
CDC42EP1-201ENST00000249014 MANSC1Q9H8J5 431 aa20.26■□□□□ 0.83
CDC42EP1-201ENST00000249014 SMYD2Q9NRG4 433 aa20.26■□□□□ 0.83
CDC42EP1-201ENST00000249014 MFHAS1Q9Y4C4 1052 aa20.26■□□□□ 0.83
CDC42EP1-201ENST00000249014 NUMBLQ9Y6R0 609 aa20.26■□□□□ 0.83
CDC42EP1-201ENST00000249014 MBLAC1A4D2B0 266 aaPredicted RBP20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 SLC15A5A6NIM6 579 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 A6NJR5 290 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 DCTN3O75935 186 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 TARSP26639 723 aaKnown RBP20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 SOX4Q06945 474 aaPredicted RBP20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 SLC45A4Q5BKX6 768 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 ANKRD23Q86SG2 305 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 CDKL3Q8IVW4 592 aaPredicted RBP20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 CTAGE3PQ8IX95 158 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 SLC2A14Q8TDB8 520 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 DNAJB3Q8WWF6 145 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 LENG1Q96BZ8 264 aaPredicted RBP20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 CSPG4P5Q96PW8 444 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 FAM111AQ96PZ2 611 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 TXLNGQ9NUQ3 528 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 KANSL3Q9P2N6 904 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 PIN4Q9Y237 131 aaKnown RBP20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 NR2E3Q9Y5X4 410 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 SMIM35A0A1B0GVV1 85 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 ALDH3A1P30838 453 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 SLC8A1P32418 973 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 MAGEA3P43357 314 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 KCNT2Q6UVM3 1135 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 PLEKHH3Q7Z736 793 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 PYROXD2Q8N2H3 581 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 RFWD2Q8NHY2 731 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 UTP4Q969X6 686 aaKnown RBP20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 TMEM237Q96Q45 408 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 SLC5A4Q9NY91 659 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 HAO1Q9UJM8 370 aa20.25■□□□□ 0.83
CDC42EP1-201ENST00000249014 UGT1A9O60656 530 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 GCATO75600 419 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 T-ENOLP0DO92 83 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 PRKCHP24723 683 aa20.24■□□□□ 0.83
CDC42EP1-201ENST00000249014 TKTP29401 623 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms