RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 LPPQ93052 612 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 ACTR5Q9H9F9 607 aaPredicted RBP16.37■□□□□ 0.21
LRFN1-201ENST00000248668 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.37■□□□□ 0.21
LRFN1-201ENST00000248668 TCRBV9S1A1TA0A576 114 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 MBLAC1A4D2B0 266 aaPredicted RBP16.37■□□□□ 0.21
LRFN1-201ENST00000248668 HUS1O60921 280 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 C6orf222P0C671 652 aaPredicted RBP16.37■□□□□ 0.21
LRFN1-201ENST00000248668 GOT1P17174 413 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 STIP1P31948 543 aaKnown RBP16.37■□□□□ 0.21
LRFN1-201ENST00000248668 TAF6P49848 677 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 BCAT1P54687 386 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 WSCD1Q658N2 575 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 PIGZQ86VD9 579 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 ANKRD52Q8NB46 1076 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 ADAM32Q8TC27 787 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 AP5M1Q9H0R1 490 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 KDM4CQ9H3R0 1056 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 NRDE2Q9H7Z3 1164 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 ETNK1Q9HBU6 452 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 MAD1L1Q9Y6D9 718 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 ZSWIM8A7E2V4 1837 aa16.36■□□□□ 0.21
LRFN1-201ENST00000248668 PIRO00625 290 aa16.36■□□□□ 0.21
LRFN1-201ENST00000248668 GRIA1P42261 906 aa16.36■□□□□ 0.21
LRFN1-201ENST00000248668 NME3Q13232 169 aa16.36■□□□□ 0.21
LRFN1-201ENST00000248668 SEPT7Q16181 437 aaKnown RBP16.36■□□□□ 0.21
LRFN1-201ENST00000248668 KIF2BQ8N4N8 673 aa16.36■□□□□ 0.21
LRFN1-201ENST00000248668 RNF169Q8NCN4 708 aa16.36■□□□□ 0.21
LRFN1-201ENST00000248668 MED10Q9BTT4 135 aa16.36■□□□□ 0.21
LRFN1-201ENST00000248668 FRMD8P1Q9BZ68 369 aaPredicted RBP16.36■□□□□ 0.21
LRFN1-201ENST00000248668 ACSS3Q9H6R3 686 aa16.36■□□□□ 0.21
LRFN1-201ENST00000248668 GBP2P32456 591 aaPredicted RBP16.36■□□□□ 0.21
LRFN1-201ENST00000248668 SPARCL1Q14515 664 aa16.36■□□□□ 0.21
LRFN1-201ENST00000248668 KCNJ11Q14654 390 aa16.36■□□□□ 0.21
LRFN1-201ENST00000248668 PDK2Q15119 407 aa16.36■□□□□ 0.21
LRFN1-201ENST00000248668 DEFB106AQ8N104 65 aa16.36■□□□□ 0.21
LRFN1-201ENST00000248668 PPM1NQ8N819 430 aa16.36■□□□□ 0.21
LRFN1-201ENST00000248668 SMG8Q8ND04 991 aaKnown RBP16.36■□□□□ 0.21
LRFN1-201ENST00000248668 KCTD15Q96SI1 283 aaPredicted RBP16.36■□□□□ 0.21
LRFN1-201ENST00000248668 SLC17A7Q9P2U7 560 aa16.36■□□□□ 0.21
LRFN1-201ENST00000248668 TRIM33Q9UPN9 1127 aa16.36■□□□□ 0.21
LRFN1-201ENST00000248668 IKBKGQ9Y6K9 419 aa16.36■□□□□ 0.21
LRFN1-201ENST00000248668 DESP17661 470 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 L1CAMP32004 1257 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 LILRA4P59901 499 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 MGAT5Q09328 741 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 PAN2Q504Q3 1202 aaKnown RBP16.35■□□□□ 0.21
LRFN1-201ENST00000248668 BSPRYQ5W0U4 402 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 CST9Q5W186 159 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 TDRPQ86YL5 185 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 DERAQ9Y315 318 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 ACTL7BQ9Y614 415 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 C17orf102A2RUQ5 167 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 EME2A4GXA9 379 aaPredicted RBP16.35■□□□□ 0.21
LRFN1-201ENST00000248668 METTL18O95568 372 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 OAS1P00973 400 aaKnown RBP16.35■□□□□ 0.21
LRFN1-201ENST00000248668 CDC25CP30307 473 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 ZNF157P51786 506 aaPredicted RBP16.35■□□□□ 0.21
LRFN1-201ENST00000248668 FAAP100Q0VG06 881 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 KCNT2Q6UVM3 1135 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 UNC93AQ86WB7 457 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 SLC24A2Q9UI40 661 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 ZMYND8Q9ULU4 1186 aaPredicted RBP16.35■□□□□ 0.21
LRFN1-201ENST00000248668 CREB3O43889 395 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 CD4P01730 458 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 SULT1E1P49888 294 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 PTK7Q13308 1070 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 MORN1Q5T089 497 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 FITM2Q8N6M3 262 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 B3GALNT2Q8NCR0 500 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 TCP10LQ8TDR4 215 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 LRRC8CQ8TDW0 803 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 DENND1AQ8TEH3 1009 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 DCAKDQ8WVC6 231 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 LGMNQ99538 433 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 SEPT10Q9P0V9 454 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 CPSF2Q9P2I0 782 aaKnown RBP16.35■□□□□ 0.21
LRFN1-201ENST00000248668 PHTF1Q9UMS5 762 aa16.35■□□□□ 0.21
LRFN1-201ENST00000248668 DPYSL4O14531 572 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 CYB561D2O14569 222 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 MLH1P40692 756 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 YWHAZP63104 245 aaKnown RBP16.34■□□□□ 0.21
LRFN1-201ENST00000248668 NR1H3Q13133 447 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 LACTB2Q53H82 288 aaPredicted RBP16.34■□□□□ 0.21
LRFN1-201ENST00000248668 MDH1BQ5I0G3 518 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 HFE2Q6ZVN8 426 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 FAM228AQ86W67 206 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 TBC1D31Q96DN5 1066 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 ZNF560Q96MR9 790 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 PAK5Q9P286 719 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 E7ESA3 106 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 UGT1A9O60656 530 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 ATP2A2P16615 1042 aaKnown RBP16.34■□□□□ 0.21
LRFN1-201ENST00000248668 MAP3K7CLP57077 242 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 CRADDP78560 199 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 OVGP1Q12889 678 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 FSCN1Q16658 493 aaKnown RBP16.34■□□□□ 0.21
LRFN1-201ENST00000248668 KLHL38Q2WGJ6 581 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 ARHGAP17Q68EM7 881 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 CXCL17Q6UXB2 119 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 FUKQ8N0W3 1084 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms