RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 CDKL3Q8IVW4 592 aaPredicted RBP13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 DNAAF3Q8N9W5 541 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 SLC16A10Q8TF71 515 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 CLEC4CQ8WTT0 213 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 DNAJC9Q8WXX5 260 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 NDRG1Q92597 394 aaKnown RBP13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 ATP2A3Q93084 1043 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 SLC7A6OSQ96CW6 309 aaPredicted RBP13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 OXNAD1Q96HP4 312 aaPredicted RBP13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 MED10Q9BTT4 135 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 PCDH18Q9HCL0 1135 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 AP4E1Q9UPM8 1137 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 C2CD4BA6NLJ0 364 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 PPEF2O14830 753 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 FAM189A1O60320 539 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 STK10O94804 968 aaKnown RBP13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 T-ENOLP0DO92 83 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 ABCG1P45844 678 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 CRYMQ14894 314 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 KHDC1Q4VXA5 237 aaKnown RBP13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 RSPH3Q86UC2 560 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 PCDH19Q8TAB3 1148 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 CDKL2Q92772 493 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 PPP1R36Q96LQ0 422 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 BTBD10Q9BSF8 475 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 EFR3BQ9Y2G0 817 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 MAGEB2O15479 319 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 PEX11AO75192 247 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 TFE3P19532 575 aaPredicted RBP13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 KCNA4P22459 653 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 CDH5P33151 784 aaPredicted RBP13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 GRM1Q13255 1194 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 STX3Q13277 289 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 R3HDM1Q15032 1099 aaKnown RBP13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 LRRC36Q1X8D7 754 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 DPP9Q86TI2 863 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 MPP5Q8N3R9 675 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 PGBD4Q96DM1 585 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 CADM1Q9BY67 442 aaKnown RBP13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 CYP3A43Q9HB55 503 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 WDR27A2RRH5 827 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 MEI4A8MW99 385 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 SPECC1L-ADORA2AF8WAN1 911 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 LGALS2P05162 132 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 F7P08709 466 aaPredicted RBP13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 SNX16P57768 344 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 PARP6Q2NL67 630 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 CCDC14Q49A88 953 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 DCAF6Q58WW2 860 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 CDCA2Q69YH5 1023 aaPredicted RBP13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 POTEAQ6S8J7 498 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 TEX9Q8N6V9 391 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 MCRS1Q96EZ8 462 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 LGMNQ99538 433 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 PDZD7Q9H5P4 517 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 MRPL42Q9Y6G3 142 aaKnown RBP13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 RBBP6Q7Z6E9 1792 aaKnown RBP13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 NVLO15381 856 aaKnown RBP13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 SPAG6O75602 509 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 APOEP02649 317 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 MCF2P10911 925 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 PTPN7P35236 360 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 ADCYAP1R1P41586 468 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 C1orf146Q5VVC0 180 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 ILDR2Q71H61 639 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 TRIM42Q8IWZ5 723 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 POU5F2Q8N7G0 328 aa13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 C18orf25Q96B23 403 aaPredicted RBP13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.06□□□□□ -0.32
RAB3IP-201ENST00000247833 ZNFX1Q9P2E3 1918 aaKnown RBP13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 ENO4A6NNW6 628 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 SMAPO00193 183 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 USP12O75317 370 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 METTL18O95568 372 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 CSH1P0DML2 217 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 CSH2P0DML3 217 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 GM2AP17900 193 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 SLC8A3P57103 927 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 PDK2Q15119 407 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 UNC5AQ6ZN44 842 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 ARMCX2Q7L311 632 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 PLPPR4Q7Z2D5 763 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 PYROXD2Q8N2H3 581 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 CLPTM1LQ96KA5 538 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 ASB7Q9H672 318 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 DCLRE1BQ9H816 532 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 SETD4Q9NVD3 440 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 LOC100653049A0A140TA62 436 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 CHADO15335 359 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 KRT34O76011 436 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 TPBGLP0DKB5 382 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 TYK2P29597 1187 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 GTF2A2P52657 109 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 SLC6A3Q01959 620 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 IFRD2Q12894 506 aaPredicted RBP13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 PID1Q7Z2X4 250 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 PPP4R1Q8TF05 950 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 OSMRQ99650 979 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 TUBB6Q9BUF5 446 aa13.05□□□□□ -0.32
RAB3IP-201ENST00000247833 BCO2Q9BYV7 579 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms