RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 ST3GAL5Q9UNP4 418 aa15.71■□□□□ 0.11
DDX49-201ENST00000247003 MYADML2A6NDP7 307 aa15.71■□□□□ 0.1
DDX49-201ENST00000247003 FSBPO95073 299 aa15.71■□□□□ 0.1
DDX49-201ENST00000247003 CTSHP09668 335 aa15.71■□□□□ 0.1
DDX49-201ENST00000247003 TFE3P19532 575 aaPredicted RBP15.71■□□□□ 0.1
DDX49-201ENST00000247003 ACAT1P24752 427 aaKnown RBP15.71■□□□□ 0.1
DDX49-201ENST00000247003 LHX1P48742 406 aa15.71■□□□□ 0.1
DDX49-201ENST00000247003 SLC18A1P54219 525 aa15.71■□□□□ 0.1
DDX49-201ENST00000247003 SPARCL1Q14515 664 aa15.71■□□□□ 0.1
DDX49-201ENST00000247003 NBPF20Q3BBV1 942 aa15.71■□□□□ 0.1
DDX49-201ENST00000247003 SLC45A4Q5BKX6 768 aa15.71■□□□□ 0.1
DDX49-201ENST00000247003 MDH1BQ5I0G3 518 aa15.71■□□□□ 0.1
DDX49-201ENST00000247003 WSCD1Q658N2 575 aa15.71■□□□□ 0.1
DDX49-201ENST00000247003 CXCL17Q6UXB2 119 aa15.71■□□□□ 0.1
DDX49-201ENST00000247003 PSTKQ8IV42 348 aaKnown RBP15.71■□□□□ 0.1
DDX49-201ENST00000247003 FUKQ8N0W3 1084 aa15.71■□□□□ 0.1
DDX49-201ENST00000247003 VPS52Q8N1B4 723 aa15.71■□□□□ 0.1
DDX49-201ENST00000247003 KCTD13Q8WZ19 329 aa15.71■□□□□ 0.1
DDX49-201ENST00000247003 CYTH2Q99418 400 aa15.71■□□□□ 0.1
DDX49-201ENST00000247003 PAIP2Q9BPZ3 127 aaKnown RBP15.71■□□□□ 0.1
DDX49-201ENST00000247003 PLCD4Q9BRC7 762 aa15.71■□□□□ 0.1
DDX49-201ENST00000247003 USP29Q9HBJ7 922 aa15.71■□□□□ 0.1
DDX49-201ENST00000247003 ETNK2Q9NVF9 386 aa15.71■□□□□ 0.1
DDX49-201ENST00000247003 DDX43Q9NXZ2 648 aaKnown RBP15.71■□□□□ 0.1
DDX49-201ENST00000247003 RCOR3Q9P2K3 495 aaPredicted RBP15.71■□□□□ 0.1
DDX49-201ENST00000247003 CAPN7Q9Y6W3 813 aa15.71■□□□□ 0.1
DDX49-201ENST00000247003 GPR182O15218 404 aa15.7■□□□□ 0.1
DDX49-201ENST00000247003 SUN1O94901 812 aa15.7■□□□□ 0.1
DDX49-201ENST00000247003 CPP00450 1065 aa15.7■□□□□ 0.1
DDX49-201ENST00000247003 IGHA2P01877 340 aa15.7■□□□□ 0.1
DDX49-201ENST00000247003 CYBAP13498 195 aa15.7■□□□□ 0.1
DDX49-201ENST00000247003 NOS2P35228 1153 aa15.7■□□□□ 0.1
DDX49-201ENST00000247003 YWHAGP61981 247 aaKnown RBP eCLIP15.7■□□□□ 0.1
DDX49-201ENST00000247003 YWHAZP63104 245 aaKnown RBP15.7■□□□□ 0.1
DDX49-201ENST00000247003 MRPS5P82675 430 aaKnown RBP15.7■□□□□ 0.1
DDX49-201ENST00000247003 SEPT7Q16181 437 aaKnown RBP15.7■□□□□ 0.1
DDX49-201ENST00000247003 PKN2Q16513 984 aaKnown RBP15.7■□□□□ 0.1
DDX49-201ENST00000247003 TTC31Q49AM3 519 aaPredicted RBP15.7■□□□□ 0.1
DDX49-201ENST00000247003 DCAF6Q58WW2 860 aa15.7■□□□□ 0.1
DDX49-201ENST00000247003 HEATR6Q6AI08 1181 aaKnown RBP15.7■□□□□ 0.1
DDX49-201ENST00000247003 DSTYKQ6XUX3 929 aa15.7■□□□□ 0.1
DDX49-201ENST00000247003 DEFB106AQ8N104 65 aa15.7■□□□□ 0.1
DDX49-201ENST00000247003 SENP8Q96LD8 212 aa15.7■□□□□ 0.1
DDX49-201ENST00000247003 CSPG4P5Q96PW8 444 aa15.7■□□□□ 0.1
DDX49-201ENST00000247003 KCTD15Q96SI1 283 aaPredicted RBP15.7■□□□□ 0.1
DDX49-201ENST00000247003 KRT82Q9NSB4 513 aa15.7■□□□□ 0.1
DDX49-201ENST00000247003 FGFR1OP2Q9NVK5 253 aa15.7■□□□□ 0.1
DDX49-201ENST00000247003 SPAG7O75391 227 aa15.69■□□□□ 0.1
DDX49-201ENST00000247003 FBXO21O94952 628 aa15.69■□□□□ 0.1
DDX49-201ENST00000247003 CA4P22748 312 aa15.69■□□□□ 0.1
DDX49-201ENST00000247003 ELK3P41970 407 aa15.69■□□□□ 0.1
DDX49-201ENST00000247003 ATXN1P54253 815 aaKnown RBP15.69■□□□□ 0.1
DDX49-201ENST00000247003 NRLP54845 237 aa15.69■□□□□ 0.1
DDX49-201ENST00000247003 GDF6Q6KF10 455 aaPredicted RBP15.69■□□□□ 0.1
DDX49-201ENST00000247003 FAM131BQ86XD5 332 aa15.69■□□□□ 0.1
DDX49-201ENST00000247003 CCDC185Q8N715 623 aa15.69■□□□□ 0.1
DDX49-201ENST00000247003 SENP6Q9GZR1 1112 aaPredicted RBP15.69■□□□□ 0.1
DDX49-201ENST00000247003 KDM4CQ9H3R0 1056 aa15.69■□□□□ 0.1
DDX49-201ENST00000247003 SSU72Q9NP77 194 aaKnown RBP15.69■□□□□ 0.1
DDX49-201ENST00000247003 GIT1Q9Y2X7 761 aa15.69■□□□□ 0.1
DDX49-201ENST00000247003 IQANK1A0A1B0GTG1 560 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 KBTBD13C9JR72 458 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 H3BRJ5 948 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 CLDN5O00501 218 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 GABRDO14764 452 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 CAPN9O14815 690 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 SNX3O60493 162 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 ATP2C2O75185 946 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 STK10O94804 968 aaKnown RBP15.68■□□□□ 0.1
DDX49-201ENST00000247003 MAP3K6O95382 1288 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 GHRP10912 638 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 MPP2Q14168 576 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 ZKSCAN8Q15776 578 aaPredicted RBP15.68■□□□□ 0.1
DDX49-201ENST00000247003 ADGRD1Q6QNK2 874 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 C4orf33Q8N1A6 199 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 TRPV1Q8NER1 839 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 GRAMD1AQ96CP6 724 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 QKIQ96PU8 341 aaKnown RBP eCLIP15.68■□□□□ 0.1
DDX49-201ENST00000247003 GAD1Q99259 594 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 SYT15Q9BQS2 421 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 POPDC2Q9HBU9 364 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 FZD10Q9ULW2 581 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 USP15Q9Y4E8 981 aaPredicted RBP15.68■□□□□ 0.1
DDX49-201ENST00000247003 CCT8L1PA6NM43 557 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 HACD1B0YJ81 288 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 ZWINTO95229 277 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 PGK1P00558 417 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 APRTP07741 180 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 INHBAP08476 426 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 RAB27AP51159 221 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 MAP3K7CLP57077 242 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 ACTN3Q08043 901 aaPredicted RBP15.68■□□□□ 0.1
DDX49-201ENST00000247003 MTM1Q13496 603 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 EFTUD2Q15029 972 aaKnown RBP eCLIP15.68■□□□□ 0.15e-7■■■■■ 47.1
DDX49-201ENST00000247003 SYCP2LQ5T4T6 812 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 HHATQ5VTY9 493 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 CLEC20AQ6ZU45 233 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 ALKBH8Q96BT7 664 aaKnown RBP15.68■□□□□ 0.1
DDX49-201ENST00000247003 LRRC39Q96DD0 335 aa15.68■□□□□ 0.1
DDX49-201ENST00000247003 UPF3AQ9H1J1 476 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms