RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 SQORQ9Y6N5 450 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 BCLAF3A2AJT9 711 aaKnown RBP19.22■□□□□ 0.67
HOXC11-201ENST00000243082 NDUFAB1O14561 156 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 NRP1O14786 923 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 BANF1O75531 89 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 B3GAT3O94766 335 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 MAP3K6O95382 1288 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 HOXD10P28358 340 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 BRCC3P46736 316 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 CCT5P48643 541 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 GRIK3Q13003 919 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 MSS51Q4VC12 460 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 PAN2Q504Q3 1202 aaKnown RBP19.22■□□□□ 0.67
HOXC11-201ENST00000243082 SYPL2Q5VXT5 272 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 GPRIN1Q7Z2K8 1008 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 NLRP14Q86W24 1093 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 ECHDC2Q86YB7 292 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 CCDC13Q8IYE1 715 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 CYP4X1Q8N118 509 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 PYROXD2Q8N2H3 581 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 ARHGEF2Q92974 986 aaKnown RBP19.22■□□□□ 0.67
HOXC11-201ENST00000243082 CSPG4P5Q96PW8 444 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 UBN1Q9NPG3 1134 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 PTCH2Q9Y6C5 1203 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 E7ESA3 106 aa19.21■□□□□ 0.67
HOXC11-201ENST00000243082 E7EVH7 732 aa19.21■□□□□ 0.67
HOXC11-201ENST00000243082 SMAPO00193 183 aa19.21■□□□□ 0.67
HOXC11-201ENST00000243082 TRPA1O75762 1119 aa19.21■□□□□ 0.67
HOXC11-201ENST00000243082 FYNP06241 537 aa19.21■□□□□ 0.67
HOXC11-201ENST00000243082 ODC1P11926 461 aa19.21■□□□□ 0.67
HOXC11-201ENST00000243082 RBL1P28749 1068 aa19.21■□□□□ 0.67
HOXC11-201ENST00000243082 PCSK1P29120 753 aa19.21■□□□□ 0.67
HOXC11-201ENST00000243082 ARL4CP56559 192 aa19.21■□□□□ 0.67
HOXC11-201ENST00000243082 BASP1P80723 227 aaKnown RBP19.21■□□□□ 0.67
HOXC11-201ENST00000243082 SLC10A2Q12908 348 aaPredicted RBP19.21■□□□□ 0.67
HOXC11-201ENST00000243082 TUSC3Q13454 348 aa19.21■□□□□ 0.67
HOXC11-201ENST00000243082 RAB41Q5JT25 222 aa19.21■□□□□ 0.67
HOXC11-201ENST00000243082 FAM182AQ5T1J6 154 aa19.21■□□□□ 0.67
HOXC11-201ENST00000243082 TRAF7Q6Q0C0 670 aa19.21■□□□□ 0.67
HOXC11-201ENST00000243082 TAOK1Q7L7X3 1001 aa19.21■□□□□ 0.67
HOXC11-201ENST00000243082 CCT8L2Q96SF2 557 aa19.21■□□□□ 0.67
HOXC11-201ENST00000243082 ULBP1Q9BZM6 244 aa19.21■□□□□ 0.67
HOXC11-201ENST00000243082 NAALADL1Q9UQQ1 740 aa19.21■□□□□ 0.67
HOXC11-201ENST00000243082 INPP5FQ9Y2H2 1132 aa19.21■□□□□ 0.67
HOXC11-201ENST00000243082 USP3Q9Y6I4 520 aa19.21■□□□□ 0.67
HOXC11-201ENST00000243082 GMNCA6NCL1 334 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 HHLA1C9JL84 531 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 KCNN4O15554 427 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 CDH16O75309 829 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 FBXO21O94952 628 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 CYP11A1P05108 521 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 CKBP12277 381 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 SKIP12755 728 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 GCAP28676 217 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 RDXP35241 583 aaKnown RBP19.2■□□□□ 0.66
HOXC11-201ENST00000243082 DAOAP59103 153 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 GBE1Q04446 702 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 WDR83Q9BRX9 315 aaKnown RBP19.2■□□□□ 0.66
HOXC11-201ENST00000243082 TRPV6Q9H1D0 765 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 POPDC2Q9HBU9 364 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 XPO7Q9UIA9 1087 aaKnown RBP19.2■□□□□ 0.66
HOXC11-201ENST00000243082 ZMYND8Q9ULU4 1186 aaPredicted RBP19.2■□□□□ 0.66
HOXC11-201ENST00000243082 CFAP69A5D8W1 941 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 FOXO6A8MYZ6 492 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 M0QZQ0 153 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 FAM107AO95990 144 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 CREB1P16220 341 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 ZFXP17010 805 aaPredicted RBP19.2■□□□□ 0.66
HOXC11-201ENST00000243082 ATP5DP30049 168 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 GPX6P59796 221 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 KCNJ11Q14654 390 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 FAM171BQ6P995 826 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 RTN4RL1Q86UN2 441 aaPredicted RBP19.2■□□□□ 0.66
HOXC11-201ENST00000243082 ANKMY2Q8IV38 441 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 PSTKQ8IV42 348 aaKnown RBP19.2■□□□□ 0.66
HOXC11-201ENST00000243082 LRRN4Q8WUT4 740 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 ATXN2LQ8WWM7 1075 aaKnown RBP19.2■□□□□ 0.66
HOXC11-201ENST00000243082 GLT1D1Q96MS3 346 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 XPO6Q96QU8 1125 aaKnown RBP19.2■□□□□ 0.66
HOXC11-201ENST00000243082 ACBD6Q9BR61 282 aa19.2■□□□□ 0.66
HOXC11-201ENST00000243082 MOXD2PA6NHM9 499 aa19.19■□□□□ 0.66
HOXC11-201ENST00000243082 YJEFN3A6XGL0 299 aa19.19■□□□□ 0.66
HOXC11-201ENST00000243082 E7ENQ6 273 aa19.19■□□□□ 0.66
HOXC11-201ENST00000243082 M0QYT0 321 aa19.19■□□□□ 0.66
HOXC11-201ENST00000243082 INPPL1O15357 1258 aa19.19■□□□□ 0.66
HOXC11-201ENST00000243082 GOT1P17174 413 aa19.19■□□□□ 0.66
HOXC11-201ENST00000243082 RAET1EQ8TD07 263 aa19.19■□□□□ 0.66
HOXC11-201ENST00000243082 PXYLP1Q8TE99 480 aa19.19■□□□□ 0.66
HOXC11-201ENST00000243082 HASPINQ8TF76 798 aa19.19■□□□□ 0.66
HOXC11-201ENST00000243082 ZNF473Q8WTR7 871 aaKnown RBP19.19■□□□□ 0.66
HOXC11-201ENST00000243082 RHOBTB2Q9BYZ6 727 aa19.19■□□□□ 0.66
HOXC11-201ENST00000243082 VPS37BQ9H9H4 285 aa19.19■□□□□ 0.66
HOXC11-201ENST00000243082 CSNK1G1Q9HCP0 422 aa19.19■□□□□ 0.66
HOXC11-201ENST00000243082 CNGB3Q9NQW8 809 aa19.19■□□□□ 0.66
HOXC11-201ENST00000243082 TMPRSS4Q9NRS4 437 aa19.19■□□□□ 0.66
HOXC11-201ENST00000243082 ETNK2Q9NVF9 386 aa19.19■□□□□ 0.66
HOXC11-201ENST00000243082 PAK5Q9P286 719 aa19.19■□□□□ 0.66
HOXC11-201ENST00000243082 TBK1Q9UHD2 729 aa19.19■□□□□ 0.66
HOXC11-201ENST00000243082 STAP1Q9ULZ2 295 aa19.19■□□□□ 0.66
HOXC11-201ENST00000243082 CLUHO75153 1309 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms