RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 C1orf186Q6ZWK4 172 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 PATL1Q86TB9 770 aaKnown RBP11.87□□□□□ -0.51
NOD1-201ENST00000222823 NT5DC3Q86UY8 548 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 UNC45BQ8IWX7 931 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 VPS37AQ8NEZ2 397 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 MAGEB18Q96M61 343 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 FAM153AQ9UHL3 310 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 TIMM13Q9Y5L4 95 aaPredicted RBP11.87□□□□□ -0.51
NOD1-201ENST00000222823 TJP1Q07157 1748 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 NPM3O75607 178 aaKnown RBP11.87□□□□□ -0.51
NOD1-201ENST00000222823 RARAP10276 462 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 DAB2P98082 770 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 SLC35G1Q2M3R5 365 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 PKN3Q6P5Z2 889 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 ANKS3Q6ZW76 656 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 VSIG10LQ86VR7 867 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 GALNT4Q8N4A0 578 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 SNX31Q8N9S9 440 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 MRPS31Q92665 395 aaKnown RBP11.87□□□□□ -0.51
NOD1-201ENST00000222823 TUBGCP3Q96CW5 907 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 SYT15Q9BQS2 421 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 UBE2OQ9C0C9 1292 aaKnown RBP11.87□□□□□ -0.51
NOD1-201ENST00000222823 SLC24A3Q9HC58 644 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.87□□□□□ -0.51
NOD1-201ENST00000222823 DDX43Q9NXZ2 648 aaKnown RBP11.87□□□□□ -0.51
NOD1-201ENST00000222823 NAALADL1Q9UQQ1 740 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 ACOT9Q9Y305 439 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 IGKV6D-41A0A0C4DH26 115 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 SLC12A8A0AV02 714 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 CASTOR2A6NHX0 329 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 EVPLLA8MZ36 301 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 CYP2F1P24903 491 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 GLRBP48167 497 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 MPP3Q13368 585 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 FLOT2Q14254 428 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 TMEM132BQ14DG7 1078 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 POLD3Q15054 466 aaPredicted RBP11.87□□□□□ -0.51
NOD1-201ENST00000222823 MAP1SQ66K74 1059 aaPredicted RBP11.87□□□□□ -0.51
NOD1-201ENST00000222823 SLC27A1Q6PCB7 646 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 MFSD7Q6UXD7 560 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 MREGQ8N565 214 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 DNAJB3Q8WWF6 145 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 CCDC126Q96EE4 140 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 ASCC2Q9H1I8 757 aaPredicted RBP11.87□□□□□ -0.51
NOD1-201ENST00000222823 AVENQ9NQS1 362 aaPredicted RBP11.87□□□□□ -0.51
NOD1-201ENST00000222823 BATF3Q9NR55 127 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 TMEM161AQ9NX61 479 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 PCDHA3Q9Y5H8 950 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 ASTN1O14525 1302 aa11.87□□□□□ -0.51
NOD1-201ENST00000222823 H7C4K7 107 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 NCAM2O15394 837 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 SPATA31C1P0DKV0 1188 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 CLK2P49760 499 aaKnown RBP11.86□□□□□ -0.51
NOD1-201ENST00000222823 SERPINB8P50452 374 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 YWHAZP63104 245 aaKnown RBP11.86□□□□□ -0.51
NOD1-201ENST00000222823 ARSHQ5FYA8 562 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 STRA8Q7Z7C7 330 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 DCLK3Q9C098 648 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 IARS2Q9NSE4 1012 aaKnown RBP11.86□□□□□ -0.51
NOD1-201ENST00000222823 TRPM5Q9NZQ8 1165 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 TIAM2Q8IVF5 1701 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 PDHXO00330 501 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 HOXA2O43364 376 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 PPP3CCP48454 512 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 NUDT2P50583 147 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 MAP3K10Q02779 954 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 UGT3A1Q6NUS8 523 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 IRF2BP2Q7Z5L9 587 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 COLGALT1Q8NBJ5 622 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 INPP4AQ96PE3 977 aaPredicted RBP11.86□□□□□ -0.51
NOD1-201ENST00000222823 AAASQ9NRG9 546 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 SUFUQ9UMX1 484 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 RUVBL2Q9Y230 463 aaKnown RBP11.86□□□□□ -0.51
NOD1-201ENST00000222823 TISP43B9A030 160 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 FANCGO15287 622 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 AKAP5P24588 427 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 ACAT1P24752 427 aaKnown RBP11.86□□□□□ -0.51
NOD1-201ENST00000222823 PPATQ06203 517 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 OVOS1Q6IE37 1185 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 PGBD3Q8N328 593 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 ARRDC4Q8NCT1 418 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 THAP11Q96EK4 314 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 RBM22Q9NW64 420 aaKnown RBP eCLIP11.86□□□□□ -0.51
NOD1-201ENST00000222823 C16orf96A6NNT2 1141 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 DCDC2CA8MYV0 355 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 ANKRD63C9JTQ0 380 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 KPNA6O60684 536 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 VPS26AO75436 327 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 TRIM16O95361 564 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 HSPA1AP0DMV8 641 aaKnown RBP11.86□□□□□ -0.51
NOD1-201ENST00000222823 HSPA1BP0DMV9 641 aaKnown RBP11.86□□□□□ -0.51
NOD1-201ENST00000222823 CNTFP26441 200 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 AVPR1AP37288 418 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 PPP3CAQ08209 521 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 MGAT5Q09328 741 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 DMC1Q14565 340 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 ERMARDQ5T6L9 678 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 ZNF280DQ6N043 979 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 TAF2Q6P1X5 1199 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 ZNF555Q8NEP9 628 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms