RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 PLSCR1O15162 318 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 SKAP2O75563 359 aaPredicted RBP19.51■□□□□ 0.71
SMPD3-201ENST00000219334 PLEKP08567 350 aaPredicted RBP19.51■□□□□ 0.71
SMPD3-201ENST00000219334 PTPRAP18433 802 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 KRT20P35900 424 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 SLC16A1P53985 500 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 ERMARDQ5T6L9 678 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 LONP2Q86WA8 852 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 PARP9Q8IXQ6 854 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 TMEM199Q8N511 208 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 EXD1Q8NHP7 514 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 SERPINB12Q96P63 405 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 IL25Q9H293 177 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 GNG14A0A1W2PPG7 69 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 FGFR1P11362 822 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 CYP2F1P24903 491 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 HALP42357 657 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 SP3Q02447 781 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 PABPC1LQ4VXU2 614 aaKnown RBP19.51■□□□□ 0.71
SMPD3-201ENST00000219334 DTX3LQ8TDB6 740 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 TINF2Q9BSI4 451 aa19.51■□□□□ 0.71
SMPD3-201ENST00000219334 A1CFQ9NQ94 594 aaKnown RBP19.51■□□□□ 0.71
SMPD3-201ENST00000219334 PTPN3P26045 913 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 PRPF39Q86UA1 669 aaKnown RBP19.5■□□□□ 0.71
SMPD3-201ENST00000219334 SLC47A2Q86VL8 602 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 ARID3BQ8IVW6 561 aaPredicted RBP19.5■□□□□ 0.71
SMPD3-201ENST00000219334 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.5■□□□□ 0.71
SMPD3-201ENST00000219334 SEMA6BQ9H3T3 888 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 CCDC134Q9H6E4 229 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 PHF20L1A8MW92 1017 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 NDUFB5O43674 189 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 APOBEC3HQ6NTF7 200 aaKnown RBP19.5■□□□□ 0.71
SMPD3-201ENST00000219334 TFAP2DQ7Z6R9 452 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 ZNF557Q8N988 423 aaPredicted RBP19.5■□□□□ 0.71
SMPD3-201ENST00000219334 C3orf20Q8ND61 904 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 TMEM159Q96B96 161 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 KAZALD1Q96I82 304 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 F8VZ95 297 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 IGSF6O95976 241 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 PCNAP12004 261 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 GALNTL6Q49A17 601 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 C3orf67Q6ZVT6 689 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 GPAMQ9HCL2 828 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 SCN3BQ9NY72 215 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 RPS6KB2Q9UBS0 482 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 RASSF9O75901 435 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 LGALS2P05162 132 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 TUBP50607 506 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 PRKAA1Q13131 559 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 SLC39A12Q504Y0 691 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 ENGASEQ8NFI3 743 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 FAM111AQ96PZ2 611 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 OSBPL1AQ9BXW6 950 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 SHCBP1LQ9BZQ2 653 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 VPS51Q9UID3 782 aa19.5■□□□□ 0.71
SMPD3-201ENST00000219334 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.5■□□□□ 0.71
SMPD3-201ENST00000219334 TAL1P17542 331 aaPredicted RBP19.49■□□□□ 0.71
SMPD3-201ENST00000219334 MAPK9P45984 424 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 C1QBPQ07021 282 aaKnown RBP19.49■□□□□ 0.71
SMPD3-201ENST00000219334 NFIL3Q16649 462 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 TTI2Q6NXR4 508 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 TBCBQ99426 244 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 KCNQ5Q9NR82 932 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 MRPL17Q9NRX2 175 aaKnown RBP19.49■□□□□ 0.71
SMPD3-201ENST00000219334 AKAP7Q9P0M2 348 aaPredicted RBP19.49■□□□□ 0.71
SMPD3-201ENST00000219334 ACOT9Q9Y305 439 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 RUNX1T1Q06455 604 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 SUGP1Q8IWZ8 645 aaKnown RBP19.49■□□□□ 0.71
SMPD3-201ENST00000219334 CELF6Q96J87 481 aaKnown RBP19.49■□□□□ 0.71
SMPD3-201ENST00000219334 CCT8L2Q96SF2 557 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 ELOVL6Q9H5J4 265 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 RAD54BQ9Y620 910 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 ARHGEF9O43307 516 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 STRA8Q7Z7C7 330 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 LZTR1Q8N653 840 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 C1QTNF7Q9BXJ2 289 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 EXOSC4Q9NPD3 245 aaKnown RBP19.49■□□□□ 0.71
SMPD3-201ENST00000219334 V9GYQ6 96 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 ATP5BP06576 529 aaKnown RBP19.49■□□□□ 0.71
SMPD3-201ENST00000219334 PSMC6P62333 389 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 ALDH6A1Q02252 535 aaKnown RBP19.49■□□□□ 0.71
SMPD3-201ENST00000219334 FNDC3BQ53EP0 1204 aaKnown RBP19.49■□□□□ 0.71
SMPD3-201ENST00000219334 CCDC149Q6ZUS6 474 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 OTOAQ7RTW8 1153 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 C11orf74Q86VG3 221 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 SLC5A5Q92911 643 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 TMEM51Q9NW97 253 aa19.49■□□□□ 0.71
SMPD3-201ENST00000219334 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.48■□□□□ 0.71
SMPD3-201ENST00000219334 LACTBL1A8MY62 500 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 TRIM66O15016 1216 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 HIRAP54198 1017 aaPredicted RBP19.48■□□□□ 0.71
SMPD3-201ENST00000219334 RIOX2Q8IUF8 465 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 COLGALT1Q8NBJ5 622 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 ZNF473Q8WTR7 871 aaKnown RBP19.48■□□□□ 0.71
SMPD3-201ENST00000219334 OSCP1Q8WVF1 389 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 ZNF558Q96NG5 402 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 ACTR8Q9H981 624 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 SPG21Q9NZD8 308 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 MPP6Q9NZW5 540 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 TNNI3P19429 210 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms