RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 KRT82Q9NSB4 513 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 FGFR1OP2Q9NVK5 253 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 MIOSQ9NXC5 875 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 NKIRAS1Q9NYS0 192 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 PSMC3IPQ9P2W1 217 aaPredicted RBP8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 GGA2Q9UJY4 613 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 CASTOR2A6NHX0 329 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 THP07101 528 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 GOT1P17174 413 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 SCNN1AP37088 669 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 ELK3P41970 407 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 MATKP42679 507 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 FLT3LGP49771 235 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 SCNN1GP51170 649 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 GEMIN4P57678 1058 aaKnown RBP8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 SLC10A2Q12908 348 aaPredicted RBP8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 SPRED3Q2MJR0 410 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 YTHDF3Q7Z739 585 aaKnown RBP8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 RSPH3Q86UC2 560 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 MICALL1Q8N3F8 863 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 RNF169Q8NCN4 708 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 CCDC197Q8NCU1 140 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 CSPG4P5Q96PW8 444 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 PAIP2Q9BPZ3 127 aaKnown RBP8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 PHACTR1Q9C0D0 580 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 TRABDQ9H4I3 376 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 AGO3Q9H9G7 860 aaKnown RBP8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 CRTAC1Q9NQ79 661 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 SAMD15Q9P1V8 674 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 PAK5Q9P286 719 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 ACTL7BQ9Y614 415 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 ARL5CA6NH57 179 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 FAM47DPA6NHR8 397 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 GABRDO14764 452 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 EFHC2Q5JST6 749 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 EFHC1Q5JVL4 640 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 MFSD14CQ5VZR4 134 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 NUGGCQ68CJ6 796 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 ARHGEF18Q6ZSZ5 1173 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 CCDC121Q6ZUS5 278 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 ARCQ7LC44 396 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 NCAPGQ9BPX3 1015 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 ETNK2Q9NVF9 386 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 ZMYND8Q9ULU4 1186 aaPredicted RBP8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 NR2E3Q9Y5X4 410 aa8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 MYO18AQ92614 2054 aaKnown RBP8.29□□□□□ -1.08
HMGXB4-201ENST00000216106 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 A0A1W2PPM1 405 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 BCLAF3A2AJT9 711 aaKnown RBP8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 KBTBD13C9JR72 458 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 KPNA6O60684 536 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 APRTP07741 180 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 MRPS5P82675 430 aaKnown RBP8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 SREBF2Q12772 1141 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 SLC25A52Q3SY17 297 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 PAN2Q504Q3 1202 aaKnown RBP8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 AGMOQ6ZNB7 445 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 HFE2Q6ZVN8 426 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 VSIG1Q86XK7 387 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 SIX6OS1Q8N1H7 587 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 NETO2Q8NC67 525 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 CKAP2Q8WWK9 683 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 TGS1Q96RS0 853 aaKnown RBP8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 PAFAH2Q99487 392 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 NSRP1Q9H0G5 558 aaKnown RBP8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 SPC25Q9HBM1 224 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 LRRC4Q9HBW1 653 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 SLC38A7Q9NVC3 462 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 SLC24A2Q9UI40 661 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 GOLGA6L7A0A1B0GV03 622 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 SMAPO00193 183 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 CHADO15335 359 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 FAM200BP0CF97 657 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 AMPD1P23109 780 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 THPOP40225 353 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 PRKCZQ05513 592 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 NR1H3Q13133 447 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 NME3Q13232 169 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 OTUD1Q5VV17 481 aaPredicted RBP8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 STRADAQ7RTN6 431 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 CTU1Q7Z7A3 348 aaKnown RBP8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 PIGWQ7Z7B1 504 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 SERINC5Q86VE9 423 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 AGGF1Q8N302 714 aaeCLIP8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 RTP4Q96DX8 246 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 SMC6Q96SB8 1091 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 ACSS3Q9H6R3 686 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 MYBPHLA2RUH7 354 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 CFAP69A5D8W1 941 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 I3L4J1 428 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 DAB1O75553 588 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 ASGR1P07306 291 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 GHRP10912 638 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 CD52P31358 61 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 TKTL1P51854 596 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 FCGRTP55899 365 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 YWHAZP63104 245 aaKnown RBP8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 SYPL2Q5VXT5 272 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 NCBP2-AS2Q69YL0 99 aa8.28□□□□□ -1.08
HMGXB4-201ENST00000216106 KCNT2Q6UVM3 1135 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms