RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 UAP1L1Q3KQV9 507 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 LRRC70Q7Z2Q7 622 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 SLC4A11Q8NBS3 891 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 ZNF624Q9P2J8 865 aaPredicted RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 AGO2Q9UKV8 859 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 PYCARDQ9ULZ3 195 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 SPATA2Q9UM82 520 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 CDYLQ9Y232 598 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 RUVBL1Q9Y265 456 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 ANKDD1BA6NHY2 528 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 H0YGN5 161 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 DNAJB2P25686 324 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 DCKP27707 260 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 UGT1A5P35504 534 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 DNASE1L1P49184 302 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 NLRP11P59045 1033 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 DLG1Q12959 904 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 USP4Q13107 963 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 UBE3CQ15386 1083 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 MTHFSDQ2M296 383 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 AP1ARQ63HQ0 302 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 ZC3H14Q6PJT7 736 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 TAF8Q7Z7C8 310 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 UBXN10Q96LJ8 280 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 AGPAT1Q99943 283 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 SH3GL1Q99961 368 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 MTMR12Q9C0I1 747 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 TDRD3Q9H7E2 651 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 TLL1O43897 1013 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 BPNT1O95861 308 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 PRLRP16471 622 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 ZNF846Q147U1 533 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 CYP51A1Q16850 503 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 ACOT1Q86TX2 421 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 WDCPQ9H6R7 721 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 ANTXR1Q9H6X2 564 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 PRR12Q9ULL5 1215 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 A6NCN8 305 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 RGL2O15211 777 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 TSPAN9O75954 239 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 PGLSO95336 258 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 UTS2BQ765I0 119 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 CACTIN-AS1Q8N1I8 211 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 SLC25A41Q8N5S1 370 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 PPM1NQ8N819 430 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 FAIM2Q9BWQ8 316 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 SENP6Q9GZR1 1112 aaPredicted RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 TTYH1Q9H313 450 aaPredicted RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 TBK1Q9UHD2 729 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 ZNF335Q9H4Z2 1342 aaPredicted RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 MSH4O15457 936 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 CPSF4O95639 269 aaKnown RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 CAPZA1P52907 286 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 RAB25P57735 213 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 INHBEP58166 350 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 ARF5P84085 180 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 BMT2Q1RMZ1 405 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 PIGSQ96S52 555 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 CYTH2Q99418 400 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 TAPBPLQ9BX59 468 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 ZNF717Q9BY31 904 aaPredicted RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 LRMDAQ9H2I8 198 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 TELO2Q9Y4R8 837 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 RIMS1Q86UR5 1692 aaKnown RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 EMSYQ7Z589 1322 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 FOXP2O15409 715 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 ASGR1P07306 291 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 LBPP18428 481 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 GTF2IRD2BQ6EKJ0 949 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 GTF2IRD2Q86UP8 949 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 MRPL50Q8N5N7 158 aaKnown RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 FAM20AQ96MK3 541 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 ENY2Q9NPA8 101 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 USP19O94966 1318 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 TBC1D3DA0A087WVF3 549 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 TBC1D3IA0A087WXS9 549 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 TBC1D3EA0A087X179 549 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 TBC1D3KA0A087X1G2 549 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 TRAV19A0A0A6YYK7 116 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 TBC1D3FA6NER0 549 aaPredicted RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 MIF4GDA9UHW6 222 aaKnown RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 TBC1D3LB9A6J9 549 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 E7EWF7 191 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 GYG2O15488 501 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 TBC1D3HP0C7X1 549 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 NR2F1P10589 423 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 RAB27AP51159 221 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 USP10Q14694 798 aaKnown RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 TBC1D3GQ6DHY5 549 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 TBC1D3CQ6IPX1 549 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 TBC1D3Q8IZP1 549 aaPredicted RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 P2RX5Q93086 422 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 PANX3Q96QZ0 392 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 DSN1Q9H410 356 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 TRPV4Q9HBA0 871 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 TRIM36Q9NQ86 728 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 ASAH2Q9NR71 780 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 TDP1Q9NUW8 608 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 AAR2Q9Y312 384 aaKnown RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 TMEM265A0A087WTH1 108 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms