RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 L1CAMP32004 1257 aa8.58□□□□□ -1.04
VAMP3-201ENST00000054666 MLH1P40692 756 aa8.58□□□□□ -1.04
VAMP3-201ENST00000054666 SLC18A1P54219 525 aa8.58□□□□□ -1.04
VAMP3-201ENST00000054666 PKN2Q16513 984 aaKnown RBP8.58□□□□□ -1.04
VAMP3-201ENST00000054666 SLC25A52Q3SY17 297 aa8.58□□□□□ -1.04
VAMP3-201ENST00000054666 MSS51Q4VC12 460 aa8.58□□□□□ -1.04
VAMP3-201ENST00000054666 SLC45A4Q5BKX6 768 aa8.58□□□□□ -1.04
VAMP3-201ENST00000054666 MDH1BQ5I0G3 518 aa8.58□□□□□ -1.04
VAMP3-201ENST00000054666 WSCD1Q658N2 575 aa8.58□□□□□ -1.04
VAMP3-201ENST00000054666 HEATR6Q6AI08 1181 aaKnown RBP8.58□□□□□ -1.04
VAMP3-201ENST00000054666 OSTM1Q86WC4 334 aa8.58□□□□□ -1.04
VAMP3-201ENST00000054666 PSTKQ8IV42 348 aaKnown RBP8.58□□□□□ -1.04
VAMP3-201ENST00000054666 FUKQ8N0W3 1084 aa8.58□□□□□ -1.04
VAMP3-201ENST00000054666 C4orf33Q8N1A6 199 aa8.58□□□□□ -1.04
VAMP3-201ENST00000054666 TMEM86AQ8N2M4 240 aa8.58□□□□□ -1.04
VAMP3-201ENST00000054666 ZFP42Q96MM3 310 aa8.58□□□□□ -1.04
VAMP3-201ENST00000054666 C11orf84Q9BUA3 381 aaPredicted RBP8.58□□□□□ -1.04
VAMP3-201ENST00000054666 TSPYL2Q9H2G4 693 aaPredicted RBP8.58□□□□□ -1.04
VAMP3-201ENST00000054666 KDM4CQ9H3R0 1056 aa8.58□□□□□ -1.04
VAMP3-201ENST00000054666 PRDM16Q9HAZ2 1276 aa8.58□□□□□ -1.04
VAMP3-201ENST00000054666 CHST12Q9NRB3 414 aa8.58□□□□□ -1.04
VAMP3-201ENST00000054666 KRT82Q9NSB4 513 aa8.58□□□□□ -1.04
VAMP3-201ENST00000054666 ETNK2Q9NVF9 386 aa8.58□□□□□ -1.04
VAMP3-201ENST00000054666 RCOR3Q9P2K3 495 aaPredicted RBP8.58□□□□□ -1.04
VAMP3-201ENST00000054666 ZMYND8Q9ULU4 1186 aaPredicted RBP8.58□□□□□ -1.04
VAMP3-201ENST00000054666 ST3GAL5Q9UNP4 418 aa8.58□□□□□ -1.04
VAMP3-201ENST00000054666 USP15Q9Y4E8 981 aaPredicted RBP8.58□□□□□ -1.04
VAMP3-201ENST00000054666 IQANK1A0A1B0GTG1 560 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 MYADML2A6NDP7 307 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 KBTBD13C9JR72 458 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 H3BRJ5 948 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 GABBR2O75899 941 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 STK10O94804 968 aaKnown RBP8.57□□□□□ -1.04
VAMP3-201ENST00000054666 MAP3K6O95382 1288 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 THP07101 528 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 APRTP07741 180 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 INHBAP08476 426 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 SLC10A3P09131 477 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 GHRP10912 638 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 TFE3P19532 575 aaPredicted RBP8.57□□□□□ -1.04
VAMP3-201ENST00000054666 ELK3P41970 407 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 LHX1P48742 406 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 ATXN1P54253 815 aaKnown RBP8.57□□□□□ -1.04
VAMP3-201ENST00000054666 NRLP54845 237 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 FCGRTP55899 365 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 GJA9P57773 515 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 MRPS5P82675 430 aaKnown RBP8.57□□□□□ -1.04
VAMP3-201ENST00000054666 ACTN3Q08043 901 aaPredicted RBP8.57□□□□□ -1.04
VAMP3-201ENST00000054666 CRHR2Q13324 411 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 MTM1Q13496 603 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 EFTUD2Q15029 972 aaKnown RBP eCLIP8.57□□□□□ -1.047e-7■■■■■ 59.7
VAMP3-201ENST00000054666 DCAF6Q58WW2 860 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 HHATQ5VTY9 493 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 CHADLQ6NUI6 762 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 CXCL17Q6UXB2 119 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 DSTYKQ6XUX3 929 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 SPATA21Q7Z572 469 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 FAM131BQ86XD5 332 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 DEFB106AQ8N104 65 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 ALKBH8Q96BT7 664 aaKnown RBP8.57□□□□□ -1.04
VAMP3-201ENST00000054666 GRAMD1AQ96CP6 724 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 QKIQ96PU8 341 aaKnown RBP eCLIP8.57□□□□□ -1.04
VAMP3-201ENST00000054666 CSPG4P5Q96PW8 444 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 KCTD15Q96SI1 283 aaPredicted RBP8.57□□□□□ -1.04
VAMP3-201ENST00000054666 SYT15Q9BQS2 421 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 USP29Q9HBJ7 922 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 SSU72Q9NP77 194 aaKnown RBP8.57□□□□□ -1.04
VAMP3-201ENST00000054666 DDX43Q9NXZ2 648 aaKnown RBP8.57□□□□□ -1.04
VAMP3-201ENST00000054666 SCN10AQ9Y5Y9 1956 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 CCT8L1PA6NM43 557 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 HACD1B0YJ81 288 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 CAPN9O14815 690 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 GPR182O15218 404 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 ATP2C2O75185 946 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 FBXO21O94952 628 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 ZWINTO95229 277 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 NOS2P35228 1153 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 YWHAZP63104 245 aaKnown RBP8.57□□□□□ -1.04
VAMP3-201ENST00000054666 GBE1Q04446 702 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 MPP2Q14168 576 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 NBPF20Q3BBV1 942 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 SYCP2LQ5T4T6 812 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 FAXCQ5TGI0 409 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 ADGRD1Q6QNK2 874 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 TRPM8Q7Z2W7 1104 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 SAPCD2Q86UD0 394 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 CCDC185Q8N715 623 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 LRRC8CQ8TDW0 803 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 KCTD13Q8WZ19 329 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 CFAP36Q96G28 342 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 SENP8Q96LD8 212 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 GAD1Q99259 594 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 WDR83Q9BRX9 315 aaKnown RBP8.57□□□□□ -1.04
VAMP3-201ENST00000054666 OSBPL7Q9BZF2 842 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 SENP6Q9GZR1 1112 aaPredicted RBP8.57□□□□□ -1.04
VAMP3-201ENST00000054666 GIT1Q9Y2X7 761 aa8.57□□□□□ -1.04
VAMP3-201ENST00000054666 SYNJ2BP-COX16A0A087WUM0 186 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 CLDN5O00501 218 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 GABRDO14764 452 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 ZNF189O75820 626 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms