RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 STX3Q13277 289 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 ZBTB41Q5SVQ8 909 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 FAXCQ5TGI0 409 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 THOC7Q6I9Y2 204 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 DSTYKQ6XUX3 929 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 PLD3Q8IV08 490 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 NDUFAF2Q8N183 169 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 ST13P5Q8NFI4 369 aaPredicted RBP12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 AGAP3Q96P47 875 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 FAM111AQ96PZ2 611 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 FAM53CQ9NYF3 392 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 MAP3K20Q9NYL2 800 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 ZNF212Q9UDV6 495 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 ECM29Q5VYK3 1845 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 ARHGEF37A1IGU5 675 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 ANKRD63C9JTQ0 380 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 TPST1O60507 370 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 LCP1P13796 627 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 STIP1P31948 543 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 FLT3P36888 993 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 DEFA1P59665 94 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 DEFA3P59666 94 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 ORC1Q13415 861 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 TMEM63BQ5T3F8 832 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 DUPD1Q68J44 220 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 RNF19BQ6ZMZ0 732 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 CCNYL1Q8N7R7 359 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 ERLEC1Q96DZ1 483 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 PXMP2Q9NR77 195 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.53□□□□□ -0.43e-6■□□□□ 8.1
TSPAN9-201ENST00000011898 FAM49BQ9NUQ9 324 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 PCMTD2Q9NV79 361 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 SRRM3A6NNA2 597 aaPredicted RBP12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 TRIM49D1C9J1S8 452 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 SH3BP5O60239 455 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 KPNA2P52292 529 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 UBE3AQ05086 875 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 PPATQ06203 517 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 TRIM25Q14258 630 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 SHROOM1Q2M3G4 852 aaPredicted RBP12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 ACAD11Q709F0 780 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 KBTBD2Q8IY47 623 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 BTBD10Q9BSF8 475 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 SYBUQ9NX95 663 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 HBS1LQ9Y450 684 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 MYH8P13535 1937 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 TRIM64CA6NLI5 447 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 NAMPTP43490 491 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 DRG2P55039 364 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 PDAP1Q13442 181 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 LBRQ14739 615 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 PGM5Q15124 567 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 BMT2Q1RMZ1 405 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 TWF2Q6IBS0 349 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 RSPH3Q86UC2 560 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 ZCCHC7Q8N3Z6 543 aaKnown RBP12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 EMC1Q8N766 993 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 FBXO36Q8NEA4 188 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 GDPD5Q8WTR4 605 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 KLRG1Q96E93 195 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 GCOM2Q9BZD3 368 aaPredicted RBP12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 KIAA1683Q9H0B3 1180 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 AP5M1Q9H0R1 490 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 CISHQ9NSE2 258 aa12.53□□□□□ -0.4
TSPAN9-201ENST00000011898 ATP9BO43861 1147 aa12.52□□□□□ -0.4
TSPAN9-201ENST00000011898 SPAG6O75602 509 aa12.52□□□□□ -0.4
TSPAN9-201ENST00000011898 TNFAIP8O95379 198 aa12.52□□□□□ -0.4
TSPAN9-201ENST00000011898 MYL2P10916 166 aa12.52□□□□□ -0.4
TSPAN9-201ENST00000011898 MYL6P60660 151 aa12.52□□□□□ -0.4
TSPAN9-201ENST00000011898 TMEM132DQ14C87 1099 aa12.52□□□□□ -0.4
TSPAN9-201ENST00000011898 MICU2Q8IYU8 434 aa12.52□□□□□ -0.4
TSPAN9-201ENST00000011898 PGBD4Q96DM1 585 aa12.52□□□□□ -0.4
TSPAN9-201ENST00000011898 VPS39Q96JC1 886 aa12.52□□□□□ -0.4
TSPAN9-201ENST00000011898 NT5C1AQ9BXI3 368 aa12.52□□□□□ -0.4
TSPAN9-201ENST00000011898 DNALI1O14645 258 aaPredicted RBP12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 ASNA1O43681 348 aa12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 CALCAP01258 141 aa12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 RPL5P46777 297 aaKnown RBP12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 SLC12A1Q13621 1099 aa12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 PERM1Q5SV97 790 aa12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 MROH9Q5TGP6 573 aa12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 RYBPQ8N488 228 aaPredicted RBP12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 ATXN2LQ8WWM7 1075 aaKnown RBP12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 ZFRQ96KR1 1074 aaKnown RBP12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 SMARCAD1Q9H4L7 1026 aa12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 PLGRKTQ9HBL7 147 aa12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 C20orf96Q9NUD7 363 aaPredicted RBP12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 TRIM17Q9Y577 477 aa12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 PIK3CDO00329 1044 aa12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 DGKIO75912 1065 aa12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 SUPT20HL2P0C7V6 817 aa12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 S100A5P33763 92 aa12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 TCF7P36402 384 aaPredicted RBP12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 EFHC2Q5JST6 749 aa12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 EFHC1Q5JVL4 640 aa12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 SPOCD1Q6ZMY3 1216 aa12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 METTL23Q86XA0 190 aa12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 SLC9A9Q8IVB4 645 aa12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 MMP19Q99542 508 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms