RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 SnphQ80U23 495 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Dnm1lQ8K1M6 742 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Dcaf6Q9DC22 876 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Tsc1Q9EP53 1161 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 Kifc1Q9QWT9 674 aa16.49■□□□□ 0.23
Trim39-203ENSMUST00000113706 CitP49025 2055 aa16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 Grik3B1AS29 919 aa16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 Gm6205E9PZS2 359 aa16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 Aldh2P47738 519 aaKnown RBP16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 Cav1P49817 178 aa16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 ChpfQ6IQX7 774 aa16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 Cyth4Q80YW0 393 aa16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 Gm6367Q8C6L9 287 aa16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 Lrrc42Q8R2U7 421 aa16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 YwhazP63101 245 aaKnown RBP16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 Nrp1P97333 923 aa16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 Tmem26Q3UP23 366 aa16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 Birc2Q62210 612 aa16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 Rad9bQ6WBX7 403 aa16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 Tbc1d19Q8VDV7 526 aa16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 Rin1Q921Q7 763 aa16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 Foxp3Q99JB6 429 aa16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 Hsf2bpQ9D4G2 338 aa16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 LactbQ9EP89 551 aa16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 Trhr2Q9ERT2 382 aa16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 Tspan3Q9QY33 253 aa16.48■□□□□ 0.23
Trim39-203ENSMUST00000113706 Pcdh7A0A0A6YY83 1255 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Tbkbp1A2A9T0 611 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Ppargc1aO70343 797 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 GlrbP48168 496 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Pms2P54279 859 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Sppl2bQ3TD49 578 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Abl2Q4JIM5 1182 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Gstt1Q64471 240 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 RbakQ8BQC8 711 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Zbtb6Q8K088 423 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Fuca2Q99KR8 461 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Raver1Q9CW46 748 aaKnown RBP16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Rec114Q9CWH4 259 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Prss23Q9D6X6 382 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Gpatch1Q9DBM1 930 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Tmed2Q9R0Q3 201 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Gm16430A6X8J1 155 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Siah3B2RWG3 268 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Ccnyl1D3YUJ3 367 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Gm3002E9PW72 216 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Gm5160F8VPN3 147 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Vmn2r39L7N2E5 861 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 NoctO35710 429 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Abraxas1Q8BPZ8 407 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Tmem209Q8BRG8 561 aaKnown RBP16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Mob2Q8VI63 235 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Pex6Q99LC9 981 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Slxl1Q9D515 155 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Orc3Q9JK30 715 aaKnown RBP16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Entpd5Q9WUZ9 427 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Proca1B0QZF7 307 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Zfp850J3QPC5 689 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Sypl2O89104 264 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 P01652 108 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 MylpfP97457 169 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Yy1Q00899 414 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Pik3r6Q3U6Q4 756 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Gm29609Q3UU56 907 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Gtf3c2Q8BL74 907 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Gpr20Q8BYC4 358 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Trem2Q99NH8 227 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Mgrn1Q9D074 532 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Clec4aQ9QZ15 238 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Mapk13Q9Z1B7 366 aa16.47■□□□□ 0.23
Trim39-203ENSMUST00000113706 Apba1B2RUJ5 842 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Kcng2F7A6P6 480 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Rag1P15919 1040 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Cyp2c37P56654 490 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Hsph1Q61699 858 aaKnown RBP16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Sec23ipQ6NZC7 998 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Cyp2c54Q6XVG2 490 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Prpsap2Q8R574 369 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Olfr1352Q8VGX5 309 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Cyp2c50Q91X77 490 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Lpgat1Q91YX5 370 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Mfsd5Q921Y4 450 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Htra2Q9JIY5 458 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Gm5485A0A1D5RM98 91 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Gm6583E9Q8Z1 469 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Fignl2J3QK54 644 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Akap1O08715 857 aaKnown RBP16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Krt8P11679 490 aaKnown RBP16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Neurog2P70447 263 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Znf112Q0VAW7 879 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Gsdmc2Q2KHK6 480 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Gsdmc4Q3TR54 480 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 TraddQ3U0V2 310 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Adat2Q6P6J0 191 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Glra2Q7TNC8 452 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Gsdmc3Q8CB12 480 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Zswim3Q8CFL8 695 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Wdr11Q8K1X1 1223 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Prrg2Q8R182 198 aa16.46■□□□□ 0.23
Trim39-203ENSMUST00000113706 Snx9Q91VH2 595 aa16.46■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms