RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Gm8271L7N2E2 218 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Soat2O88908 525 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Gpc4P51655 557 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Kcnq1P97414 668 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Tmem63bQ3TWI9 832 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 B3gnt3Q5JCS9 372 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Trim38Q5SZ99 471 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Scube3Q66PY1 993 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Exoc3l4Q6DIA2 721 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Akap7Q7TN79 314 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Anapc5Q8BTZ4 740 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Mgat5Q8R4G6 740 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Spon1Q8VCC9 807 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Pcna-ps2A0A140T8V5 261 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 A630010A05RikA9C473 232 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Has3O08650 554 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Il2P04351 169 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 PcnaP17918 261 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ly9Q01965 654 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Q3UE31 404 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Fbxw2Q60584 422 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 PterQ60866 349 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 NfascQ810U3 1240 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ppp4r1Q8K2V1 951 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ggt7Q99JP7 662 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Med21Q9CQ39 144 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Dis3Q9CSH3 958 aaKnown RBP10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Vwa7Q9JHA8 891 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Tbk1Q9WUN2 729 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Asb1Q9WV74 336 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Bub1bQ9Z1S0 1052 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Zfp831A2ADM8 1628 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Olfr271-ps1A0A1L1SQH2 283 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 E230025N22RikG5E8S3 482 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Tnfrsf11bO08712 401 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 DcxO88809 366 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ampd1Q3V1D3 745 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 CttnQ60598 546 aaKnown RBP10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Hif1aQ61221 836 aaKnown RBP10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Fbxw8Q8BIA4 598 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 EmsyQ8BMB0 1264 aaKnown RBP10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Taf2Q8C176 1104 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Sept10Q8C650 452 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Sik2Q8CFH6 931 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Pcdha2Q91Y17 948 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Lrp8Q924X6 996 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Slc12a9Q99MR3 914 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ripk3Q9QZL0 486 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 PodxlQ9R0M4 503 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Atp6v1c1Q9Z1G3 382 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Cntnap4Q99P47 1310 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Mindy4b-psA0A1W2P7H6 457 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Mfsd4b4J3QNS5 503 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Glb1P23780 647 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ttc9Q3V038 219 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Tpp2Q64514 1262 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Sp140Q6NSQ5 534 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 PoliQ6R3M4 717 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Moxd2Q7TT41 619 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 TdrkhQ80VL1 560 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Olfr385Q8VGT1 312 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 EtfbQ9DCW4 255 aaKnown RBP10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 ParvbQ9ES46 365 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Zfp646Q6NV66 1788 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Gm27029A2A4P4 543 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Zbed6D2EAC2 980 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Gm7694J3QNH8 270 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 ChkaO54804 453 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 IkbkgO88522 412 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 ItgalP24063 1163 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Gucy2eP52785 1108 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ddr2Q62371 854 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 PimregQ8BFY7 231 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Sh3kbp1Q8R550 709 aaKnown RBP10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Nt5c1bQ91YE9 573 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 PdgfdQ925I7 370 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 1700123K08RikQ9D991 295 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Serpina1fQ9DCQ7 411 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Togaram1Q6A070 1776 aaKnown RBP10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Mroh7A2AVR2 1279 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Plekha5E9Q6H8 1269 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Gm8909G3UXE9 396 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Dsg3O35902 993 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 StrnO55106 780 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Acot1O55137 419 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ptp4a2O70274 167 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Abcb1bP06795 1276 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Kcna2P63141 499 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 E330034G19RikQ3UWX6 351 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Grb10Q60760 621 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Itih3Q61704 889 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ripor1Q68FE6 1223 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Olfr1057Q7TR75 315 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Olfr23Q7TRX4 325 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Tmem82Q8R115 356 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Clptm1Q8VBZ3 664 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Slc25a11Q9CR62 314 aaKnown RBP10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Homer2Q9QWW1 354 aa10.04□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Gm3173A6NAS3 172 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Gm3020E9Q3J7 150 aa10.03□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms