RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 SCN4BQ8IWT1 228 aa18.36■□□□□ 0.53
PHGDH-232ENST00000641947 RUBCNQ92622 972 aa18.36■□□□□ 0.53
PHGDH-232ENST00000641947 BADQ92934 168 aa18.36■□□□□ 0.53
PHGDH-232ENST00000641947 FUBP3Q96I24 572 aaKnown RBP eCLIP18.36■□□□□ 0.53
PHGDH-232ENST00000641947 ARGLU1Q9NWB6 273 aaPredicted RBP18.36■□□□□ 0.53
PHGDH-232ENST00000641947 MTMR11A4FU01 709 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 BAIAP3O94812 1187 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 LTFP02788 710 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 RPL17P18621 184 aaKnown RBP18.35■□□□□ 0.53
PHGDH-232ENST00000641947 IFRD2Q12894 506 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-232ENST00000641947 DPYSL3Q14195 570 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 NFE2Q16621 373 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-232ENST00000641947 STRADAQ7RTN6 431 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 DDX42Q86XP3 938 aaKnown RBP eCLIP18.35■□□□□ 0.533e-6■■■□□ 16.1
PHGDH-232ENST00000641947 JAMLQ86YT9 394 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 SLC39A11Q8N1S5 342 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 KCTD6Q8NC69 237 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 ADAM32Q8TC27 787 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 HNRNPLLQ8WVV9 542 aaKnown RBP18.35■□□□□ 0.53
PHGDH-232ENST00000641947 EDEM1Q92611 657 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 PRDM10Q9NQV6 1147 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 PCDHB5Q9Y5E4 795 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 EFCAB14O75071 495 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 CPB1P15086 417 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 IL4RP24394 825 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 TNFRSF8P28908 595 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 ECHS1P30084 290 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 CDH6P55285 790 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 BTG3Q14201 252 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-232ENST00000641947 SPOUT1Q5T280 376 aaKnown RBP18.35■□□□□ 0.53
PHGDH-232ENST00000641947 ZNF365Q70YC5 407 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 CMTR2Q8IYT2 770 aaKnown RBP18.35■□□□□ 0.53
PHGDH-232ENST00000641947 SCML4Q8N228 414 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 CCDC26Q8TAB7 109 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 TEKT4Q8WW24 435 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 HAUS1Q96CS2 278 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 TMPRSS4Q9NRS4 437 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 PIGVQ9NUD9 493 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 CXXC1Q9P0U4 656 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-232ENST00000641947 CDY1Q9Y6F8 540 aa18.35■□□□□ 0.53
PHGDH-232ENST00000641947 SYNJ2BP-COX16A0A087WUM0 186 aa18.34■□□□□ 0.53
PHGDH-232ENST00000641947 MDM4O15151 490 aa18.34■□□□□ 0.53
PHGDH-232ENST00000641947 TUBBP07437 444 aa18.34■□□□□ 0.53
PHGDH-232ENST00000641947 MAGEA11P43364 429 aa18.34■□□□□ 0.53
PHGDH-232ENST00000641947 FNTAP49354 379 aa18.34■□□□□ 0.53
PHGDH-232ENST00000641947 GPR17Q13304 367 aa18.34■□□□□ 0.53
PHGDH-232ENST00000641947 DHX34Q14147 1143 aaKnown RBP18.34■□□□□ 0.53
PHGDH-232ENST00000641947 USP41Q3LFD5 358 aa18.34■□□□□ 0.53
PHGDH-232ENST00000641947 ODF2Q5BJF6 829 aa18.34■□□□□ 0.53
PHGDH-232ENST00000641947 ANKS3Q6ZW76 656 aa18.34■□□□□ 0.53
PHGDH-232ENST00000641947 MAATS1Q7Z4T9 603 aa18.34■□□□□ 0.53
PHGDH-232ENST00000641947 FAM131BQ86XD5 332 aa18.34■□□□□ 0.53
PHGDH-232ENST00000641947 COLGALT1Q8NBJ5 622 aa18.34■□□□□ 0.53
PHGDH-232ENST00000641947 MAIP1Q8WWC4 291 aa18.34■□□□□ 0.53
PHGDH-232ENST00000641947 RIN2Q8WYP3 895 aaPredicted RBP18.34■□□□□ 0.53
PHGDH-232ENST00000641947 IRGQQ8WZA9 623 aa18.34■□□□□ 0.53
PHGDH-232ENST00000641947 SEC14L1Q92503 715 aa18.34■□□□□ 0.53
PHGDH-232ENST00000641947 PCDH18Q9HCL0 1135 aa18.34■□□□□ 0.53
PHGDH-232ENST00000641947 MTMR10Q9NXD2 777 aa18.34■□□□□ 0.53
PHGDH-232ENST00000641947 COX16Q9P0S2 106 aa18.34■□□□□ 0.53
PHGDH-232ENST00000641947 SAE1Q9UBE0 346 aaPredicted RBP18.34■□□□□ 0.53
PHGDH-232ENST00000641947 MTRRQ9UBK8 725 aa18.34■□□□□ 0.53
PHGDH-232ENST00000641947 SLC27A5Q9Y2P5 690 aa18.34■□□□□ 0.53
PHGDH-232ENST00000641947 CHD9Q3L8U1 2897 aa18.33■□□□□ 0.53
PHGDH-232ENST00000641947 M0QYT0 321 aa18.33■□□□□ 0.53
PHGDH-232ENST00000641947 LINC00271P0C7V0 271 aa18.33■□□□□ 0.53
PHGDH-232ENST00000641947 NCAM1P13591 858 aa18.33■□□□□ 0.53
PHGDH-232ENST00000641947 USP46P62068 366 aa18.33■□□□□ 0.53
PHGDH-232ENST00000641947 DYNLT1P63172 113 aa18.33■□□□□ 0.53
PHGDH-232ENST00000641947 BOLA3Q53S33 107 aa18.33■□□□□ 0.53
PHGDH-232ENST00000641947 BSPRYQ5W0U4 402 aa18.33■□□□□ 0.53
PHGDH-232ENST00000641947 TMCO3Q6UWJ1 677 aa18.33■□□□□ 0.53
PHGDH-232ENST00000641947 VSTM1Q6UX27 236 aa18.33■□□□□ 0.53
PHGDH-232ENST00000641947 FAM71BQ8TC56 605 aa18.33■□□□□ 0.53
PHGDH-232ENST00000641947 GPR152Q8TDT2 470 aa18.33■□□□□ 0.53
PHGDH-232ENST00000641947 AENQ8WTP8 325 aaKnown RBP18.33■□□□□ 0.53
PHGDH-232ENST00000641947 C8orf48Q96LL4 319 aa18.33■□□□□ 0.53
PHGDH-232ENST00000641947 ZNF558Q96NG5 402 aa18.33■□□□□ 0.53
PHGDH-232ENST00000641947 CALN1Q9BXU9 219 aa18.33■□□□□ 0.53
PHGDH-232ENST00000641947 NEUROG2Q9H2A3 272 aa18.33■□□□□ 0.53
PHGDH-232ENST00000641947 ANLNQ9NQW6 1124 aa18.33■□□□□ 0.53
PHGDH-232ENST00000641947 WDR27A2RRH5 827 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 ZBBXA8MT70 800 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 H7C4K7 107 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 I6L893 689 aaPredicted RBP18.32■□□□□ 0.52
PHGDH-232ENST00000641947 C2CD2LO14523 706 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 CST8O60676 142 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 TJP3O95049 919 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 CETN2P41208 172 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 PSMD5Q16401 504 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 CCNG2Q16589 344 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 ERMARDQ5T6L9 678 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 BBS12Q6ZW61 710 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 SCD5Q86SK9 330 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 IFT20Q8IY31 132 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 CCDC105Q8IYK2 499 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 C7orf61Q8IZ16 206 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 FBXO22Q8NEZ5 403 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 SLC7A14Q8TBB6 771 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 IFT81Q8WYA0 676 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms