RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 PDZD8Q8NEN9 1154 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 CASP10Q92851 521 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 CALR3Q96L12 384 aaKnown RBP18.28■□□□□ 0.52
PHGDH-230ENST00000641927 GAS2L1Q99501 681 aaPredicted RBP18.28■□□□□ 0.52
PHGDH-230ENST00000641927 ZNF334Q9HCZ1 680 aaPredicted RBP18.28■□□□□ 0.52
PHGDH-230ENST00000641927 ABCC13Q9NSE7 274 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 USTQ9Y2C2 406 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 MTCH2Q9Y6C9 303 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 GRID2IPA4D2P6 1211 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 HOXA9P31269 272 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 PSEN1P49768 467 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 ZNF143P52747 638 aaPredicted RBP18.28■□□□□ 0.52
PHGDH-230ENST00000641927 GNG11P61952 73 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 ATP11AP98196 1134 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 ADGRE1Q14246 886 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 CDO1Q16878 200 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 SYPL2Q5VXT5 272 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 EP400NLQ6ZTU2 488 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 RSRC2Q7L4I2 434 aaKnown RBP18.28■□□□□ 0.52
PHGDH-230ENST00000641927 ARCQ7LC44 396 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 HS6ST3Q8IZP7 471 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 EFHBQ8N7U6 833 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 TRIM58Q8NG06 486 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 RNF139Q8WU17 664 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 C16orf45Q96MC5 204 aaPredicted RBP18.28■□□□□ 0.52
PHGDH-230ENST00000641927 SLC2A13Q96QE2 648 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 PIDD1Q9HB75 910 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 ASAH2Q9NR71 780 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 HCFC1R1Q9NWW0 138 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 TRPM5Q9NZQ8 1165 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 STAP1Q9ULZ2 295 aa18.28■□□□□ 0.52
PHGDH-230ENST00000641927 ZNF638Q14966 1978 aaKnown RBP18.27■□□□□ 0.52
PHGDH-230ENST00000641927 LINC01565O15544 149 aa18.27■□□□□ 0.52
PHGDH-230ENST00000641927 FYNP06241 537 aa18.27■□□□□ 0.52
PHGDH-230ENST00000641927 RALAP11233 206 aa18.27■□□□□ 0.52
PHGDH-230ENST00000641927 MYL4P12829 197 aa18.27■□□□□ 0.52
PHGDH-230ENST00000641927 NOS2P35228 1153 aa18.27■□□□□ 0.52
PHGDH-230ENST00000641927 SSR1P43307 286 aaKnown RBP18.27■□□□□ 0.52
PHGDH-230ENST00000641927 SULT1E1P49888 294 aa18.27■□□□□ 0.52
PHGDH-230ENST00000641927 PIGHQ14442 188 aaPredicted RBP18.27■□□□□ 0.52
PHGDH-230ENST00000641927 C15orf59Q2T9L4 293 aaPredicted RBP18.27■□□□□ 0.52
PHGDH-230ENST00000641927 TMC5Q6UXY8 1006 aa18.27■□□□□ 0.52
PHGDH-230ENST00000641927 SYCE1Q8N0S2 351 aa18.27■□□□□ 0.52
PHGDH-230ENST00000641927 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.27■□□□□ 0.52
PHGDH-230ENST00000641927 FNIP1Q8TF40 1166 aa18.27■□□□□ 0.52
PHGDH-230ENST00000641927 OVCA2Q8WZ82 227 aa18.27■□□□□ 0.52
PHGDH-230ENST00000641927 CNPY3Q9BT09 278 aa18.27■□□□□ 0.52
PHGDH-230ENST00000641927 PRKD2Q9BZL6 878 aa18.27■□□□□ 0.52
PHGDH-230ENST00000641927 SFXN1Q9H9B4 322 aa18.27■□□□□ 0.52
PHGDH-230ENST00000641927 DZANK1Q9NVP4 752 aa18.27■□□□□ 0.52
PHGDH-230ENST00000641927 OSER1Q9NX31 292 aa18.27■□□□□ 0.52
PHGDH-230ENST00000641927 LCMT1Q9UIC8 334 aa18.27■□□□□ 0.52
PHGDH-230ENST00000641927 NUDT5Q9UKK9 219 aa18.27■□□□□ 0.52
PHGDH-230ENST00000641927 HYOU1Q9Y4L1 999 aa18.27■□□□□ 0.52
PHGDH-230ENST00000641927 SYNJ2BP-COX16A0A087WUM0 186 aa18.26■□□□□ 0.51
PHGDH-230ENST00000641927 PROSCO94903 275 aa18.26■□□□□ 0.51
PHGDH-230ENST00000641927 RARGP13631 454 aa18.26■□□□□ 0.51
PHGDH-230ENST00000641927 PTPN2P17706 415 aa18.26■□□□□ 0.51
PHGDH-230ENST00000641927 GABRR2P28476 465 aa18.26■□□□□ 0.51
PHGDH-230ENST00000641927 ZNF252P-AS1Q0IIN9 211 aa18.26■□□□□ 0.51
PHGDH-230ENST00000641927 KCNC3Q14003 757 aa18.26■□□□□ 0.51
PHGDH-230ENST00000641927 CCDC14Q49A88 953 aa18.26■□□□□ 0.51
PHGDH-230ENST00000641927 PABPC1LQ4VXU2 614 aaKnown RBP18.26■□□□□ 0.51
PHGDH-230ENST00000641927 C11orf63Q6NUN7 778 aa18.26■□□□□ 0.51
PHGDH-230ENST00000641927 GCNAQ96QF7 691 aa18.26■□□□□ 0.51
PHGDH-230ENST00000641927 DDX23Q9BUQ8 820 aaKnown RBP18.26■□□□□ 0.51
PHGDH-230ENST00000641927 NACA2Q9H009 215 aa18.26■□□□□ 0.51
PHGDH-230ENST00000641927 CLIC5Q9NZA1 410 aa18.26■□□□□ 0.51
PHGDH-230ENST00000641927 COX16Q9P0S2 106 aa18.26■□□□□ 0.51
PHGDH-230ENST00000641927 SZT2Q5T011 3432 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 ZNF840PA6NDX5 716 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 SPOPO43791 374 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 GLP2RO95838 553 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 FTCDO95954 541 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 SLC25A52Q3SY17 297 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 DAB2IPQ5VWQ8 1189 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 PDZD4Q76G19 769 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-230ENST00000641927 SLC35F6Q8N357 371 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 ADAM32Q8TC27 787 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 SMG7Q92540 1137 aaKnown RBP18.25■□□□□ 0.51
PHGDH-230ENST00000641927 APOL5Q9BWW9 433 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 FAM204AQ9H8W3 233 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 ALG6Q9Y672 507 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 M0QYT0 321 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 DPYSL4O14531 572 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 TLR5O60602 858 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 RNF8O76064 485 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 TNNT1P13805 278 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 TFE3P19532 575 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-230ENST00000641927 COMTP21964 271 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 PPP3CCP48454 512 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 NME3Q13232 169 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 C10orf120Q5SQS8 335 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 RARS2Q5T160 578 aaKnown RBP18.25■□□□□ 0.51
PHGDH-230ENST00000641927 SH3PXD2AQ5TCZ1 1133 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 PEX26Q7Z412 305 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 GRASPQ7Z6J2 395 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-230ENST00000641927 CPNE8Q86YQ8 564 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 TMC8Q8IU68 726 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 LRRC57Q8N9N7 239 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms