RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	DPEP3	Q9H4B8	488 aa		10.64	□□□□□ -0.71
PHGDH-222	ENST00000641587	ARHGEF4	Q9NR80	690 aa		10.64	□□□□□ -0.71
PHGDH-222	ENST00000641587	INTS13	Q9NVM9	706 aa		10.64	□□□□□ -0.71
PHGDH-222	ENST00000641587	CDH9	Q9ULB4	789 aa		10.64	□□□□□ -0.71
PHGDH-222	ENST00000641587	EXOC7	Q9UPT5	735 aa		10.64	□□□□□ -0.71
PHGDH-222	ENST00000641587	SMG1	Q96Q15	3661 aa	Known RBP	10.64	□□□□□ -0.71
PHGDH-222	ENST00000641587	NBEA	Q8NFP9	2946 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	DSP	P15924	2871 aa	Known RBP	10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	TMEM8B	A6NDV4	472 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	CLDN5	O00501	218 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	TNFRSF10B	O14763	440 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	TRIM24	O15164	1050 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	CALU	O43852	315 aa	Predicted RBP	10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	LDHA	P00338	332 aa	Known RBP	10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	APOD	P05090	189 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	MBL2	P11226	248 aa	Predicted RBP	10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	ADH5	P11766	374 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	WARS	P23381	471 aa	Known RBP	10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	ANXA13	P27216	316 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	WAS	P42768	502 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	LMAN2	Q12907	356 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	TAF10	Q12962	218 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	SEMA3B	Q13214	749 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	KNOP1	Q1ED39	458 aa	Known RBP	10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	BMT2	Q1RMZ1	405 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	LY6G5C	Q5SRR4	150 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	LYSMD4	Q5XG99	296 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	VSTM1	Q6UX27	236 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	HS2ST1	Q7LGA3	356 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	PIP4P1	Q86T03	277 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	CBWD2	Q8IUF1	395 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	DHX40	Q8IX18	779 aa	Known RBP	10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	GPD1L	Q8N335	351 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	CCDC26	Q8TAB7	109 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	ZNF507	Q8TCN5	953 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	WBP2	Q969T9	261 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	ANKRD36BP1	Q96IX9	119 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	ZFR	Q96KR1	1074 aa	Known RBP	10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	ZNF518B	Q9C0D4	1074 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	POLM	Q9NP87	494 aa	Predicted RBP	10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	CD93	Q9NPY3	652 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	PILRB	Q9UKJ0	227 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	HCN2	Q9UL51	889 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	LHX6	Q9UPM6	363 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	NFE2L3	Q9Y4A8	694 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	NEUROG3	Q9Y4Z2	214 aa		10.63	□□□□□ -0.71
PHGDH-222	ENST00000641587	FASN	P49327	2511 aa	Known RBP	10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	TAF4	O00268	1085 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	IKBKB	O14920	756 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	GABRG2	P18507	467 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	PDE6C	P51160	858 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	PMS1	P54277	932 aa	Known RBP	10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	LRRC63	Q05C16	580 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	MYO1E	Q12965	1108 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	IQCB1	Q15051	598 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	HSP90AA4P	Q58FG1	418 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	EOGT	Q5NDL2	527 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	PEAR1	Q5VY43	1037 aa	Predicted RBP	10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	ANKRD40	Q6AI12	368 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	TTI2	Q6NXR4	508 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	SLC23A3	Q6PIS1	610 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	MIB1	Q86YT6	1006 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	CREBRF	Q8IUR6	639 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	CHCHD4	Q8N4Q1	142 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	GOLGA5	Q8TBA6	731 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	MYCBPAP	Q8TBZ2	947 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	ENOX1	Q8TC92	643 aa	Known RBP	10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	CAMK1G	Q96NX5	476 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	MMS19	Q96T76	1030 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	KCTD10	Q9H3F6	313 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	SLC32A1	Q9H598	525 aa		10.62	□□□□□ -0.71
PHGDH-222	ENST00000641587	PDXK	O00764	312 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	TRIM66	O15016	1216 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	CLIC2	O15247	247 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	COCH	O43405	550 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	FGFR1OP	O95684	399 aa	Known RBP	10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	ADH1C	P00326	375 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	CST3	P01034	146 aa	Predicted RBP	10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	TNNC2	P02585	160 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	IRF1	P10914	325 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	PFKL	P17858	780 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	CDK11B	P21127	795 aa	Known RBP	10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	NR2F2	P24468	414 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	HOXD13	P35453	343 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	EIF2D	P41214	584 aa	Known RBP	10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	GRIA2	P42262	883 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	CYP2J2	P51589	502 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	NOP14	P78316	857 aa	Known RBP	10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	RPL6	Q02878	288 aa	Known RBP	10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	ACAP1	Q15027	740 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	DPH6	Q7L8W6	267 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	SLC41A1	Q8IVJ1	513 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	BBS7	Q8IWZ6	715 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	ETFBKMT	Q8IXQ9	262 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	MINDY1	Q8N5J2	469 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	ZNF513	Q8N8E2	541 aa	Predicted RBP	10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	ELMO3	Q96BJ8	720 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	EEF2KMT	Q96G04	330 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	C8orf48	Q96LL4	319 aa		10.61	□□□□□ -0.71
PHGDH-222	ENST00000641587	SRRT	Q9BXP5	876 aa	Known RBP	10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms