RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	DDX23	Q9BUQ8	820 aa	Known RBP	18.57	■□□□□ 0.56
SPIN3-238	ENST00000640421	ZNF334	Q9HCZ1	680 aa	Predicted RBP	18.57	■□□□□ 0.56
SPIN3-238	ENST00000640421	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	18.57	■□□□□ 0.56
SPIN3-238	ENST00000640421	DPYSL4	O14531	572 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	CSH1	P0DML2	217 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	CSH2	P0DML3	217 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	EPHB3	P54753	998 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	ATP11A	P98196	1134 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	PLD1	Q13393	1074 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	KCNC3	Q14003	757 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	CDO1	Q16878	200 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	NT5C3B	Q969T7	300 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	CNPY3	Q9BT09	278 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	TLR10	Q9BXR5	811 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	PLEKHA4	Q9H4M7	779 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	PRDM12	Q9H4Q4	367 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	COMMD8	Q9NX08	183 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	NUDT5	Q9UKK9	219 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	UST	Q9Y2C2	406 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	NRG2	O14511	850 aa	Predicted RBP	18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	CCL16	O15467	120 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	TADA3	O75528	432 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	ZMYND10	O75800	440 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	C1R	P00736	705 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	ATP1A1	P05023	1023 aa	Known RBP	18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	ZDHHC11B	P0C7U3	371 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	NCAM1	P13591	858 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	SDC4	P31431	198 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	ATXN1	P54253	815 aa	Known RBP	18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	VEPH1	Q14D04	833 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	MEI1	Q5TIA1	1274 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	TMEM150A	Q86TG1	271 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	SYCE1	Q8N0S2	351 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	CD101	Q93033	1021 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	TRMT2B	Q96GJ1	504 aa	Known RBP	18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	TBCB	Q99426	244 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	NPY6R	Q99463	290 aa		18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	RRAGD	Q9NQL2	400 aa	Predicted RBP	18.56	■□□□□ 0.56
SPIN3-238	ENST00000640421	UNC80	Q8N2C7	3258 aa		18.55	■□□□□ 0.56
SPIN3-238	ENST00000640421	OBSL1	O75147	1896 aa		18.55	■□□□□ 0.56
SPIN3-238	ENST00000640421	LRCH4	O75427	683 aa		18.55	■□□□□ 0.56
SPIN3-238	ENST00000640421	LRG1	P02750	347 aa		18.55	■□□□□ 0.56
SPIN3-238	ENST00000640421	MAN1A1	P33908	653 aa		18.55	■□□□□ 0.56
SPIN3-238	ENST00000640421	NOS2	P35228	1153 aa		18.55	■□□□□ 0.56
SPIN3-238	ENST00000640421	PTPN9	P43378	593 aa		18.55	■□□□□ 0.56
SPIN3-238	ENST00000640421	MARCKSL1	P49006	195 aa		18.55	■□□□□ 0.56
SPIN3-238	ENST00000640421	TAS2R40	P59535	323 aa		18.55	■□□□□ 0.56
SPIN3-238	ENST00000640421	PIGH	Q14442	188 aa	Predicted RBP	18.55	■□□□□ 0.56
SPIN3-238	ENST00000640421	GRIN2C	Q14957	1233 aa		18.55	■□□□□ 0.56
SPIN3-238	ENST00000640421	PPM1L	Q5SGD2	360 aa		18.55	■□□□□ 0.56
SPIN3-238	ENST00000640421	ZNF697	Q5TEC3	545 aa		18.55	■□□□□ 0.56
SPIN3-238	ENST00000640421	PEX26	Q7Z412	305 aa		18.55	■□□□□ 0.56
SPIN3-238	ENST00000640421	BNIPL	Q7Z465	357 aa		18.55	■□□□□ 0.56
SPIN3-238	ENST00000640421	ADAM32	Q8TC27	787 aa		18.55	■□□□□ 0.56
SPIN3-238	ENST00000640421	LRRC3	Q9BY71	257 aa		18.55	■□□□□ 0.56
SPIN3-238	ENST00000640421	ANAPC1	Q9H1A4	1944 aa		18.55	■□□□□ 0.56
SPIN3-238	ENST00000640421	CAPN9	O14815	690 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	HDAC4	P56524	1084 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	SLC25A52	Q3SY17	297 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	TMC8	Q8IU68	726 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	HS6ST3	Q8IZP7	471 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	FAM172A	Q8WUF8	416 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	CENPI	Q92674	756 aa	Predicted RBP	18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	KRT35	Q92764	455 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	LRCH3	Q96II8	777 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	SLITRK1	Q96PX8	696 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	IL21	Q9HBE4	155 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	ABCC13	Q9NSE7	274 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	JRKL	Q9Y4A0	524 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	SPOP	O43791	374 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	SULT1E1	P49888	294 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	DNA2	P51530	1060 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	TCEAL5	Q5H9L2	206 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	BTBD8	Q5XKL5	378 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	TXNRD3NB	Q6F5E7	133 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	CC2D1A	Q6P1N0	951 aa	Predicted RBP	18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	BEND5	Q7L4P6	421 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	ZNF592	Q92610	1267 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	GOLGA1	Q92805	767 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	HES6	Q96HZ4	224 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	TLR8	Q9NR97	1041 aa	Known RBP	18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	HCFC1R1	Q9NWW0	138 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	ASB3	Q9Y575	518 aa		18.54	■□□□□ 0.56
SPIN3-238	ENST00000640421	NOTCH4	Q99466	2003 aa		18.53	■□□□□ 0.56
SPIN3-238	ENST00000640421	GLP2R	O95838	553 aa		18.53	■□□□□ 0.56
SPIN3-238	ENST00000640421	TBX18	O95935	607 aa		18.53	■□□□□ 0.56
SPIN3-238	ENST00000640421	IL1R2	P27930	398 aa		18.53	■□□□□ 0.56
SPIN3-238	ENST00000640421	SLC1A1	P43005	524 aa		18.53	■□□□□ 0.56
SPIN3-238	ENST00000640421	SLC25A11	Q02978	314 aa	Known RBP	18.53	■□□□□ 0.56
SPIN3-238	ENST00000640421	HYAL1	Q12794	435 aa		18.53	■□□□□ 0.56
SPIN3-238	ENST00000640421	TAF12	Q16514	161 aa		18.53	■□□□□ 0.56
SPIN3-238	ENST00000640421	PRPF38B	Q5VTL8	546 aa	Known RBP	18.53	■□□□□ 0.56
SPIN3-238	ENST00000640421	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	18.53	■□□□□ 0.56
SPIN3-238	ENST00000640421	TAC4	Q86UU9	113 aa		18.53	■□□□□ 0.56
SPIN3-238	ENST00000640421	ITIH5	Q86UX2	942 aa		18.53	■□□□□ 0.56
SPIN3-238	ENST00000640421	DQX1	Q8TE96	717 aa	Known RBP	18.53	■□□□□ 0.56
SPIN3-238	ENST00000640421	CASP10	Q92851	521 aa		18.53	■□□□□ 0.56
SPIN3-238	ENST00000640421	ZNF512	Q96ME7	567 aa	Predicted RBP	18.53	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms