RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 MYCBPAPQ8TBZ2 947 aa5.85□□□□□ -1.47
PDE4D-229ENST00000638939 OVCA2Q8WZ82 227 aa5.85□□□□□ -1.47
PDE4D-229ENST00000638939 UBXN4Q92575 508 aa5.85□□□□□ -1.47
PDE4D-229ENST00000638939 GATA6Q92908 595 aa5.85□□□□□ -1.47
PDE4D-229ENST00000638939 FOXJ1Q92949 421 aa5.85□□□□□ -1.47
PDE4D-229ENST00000638939 OTUB2Q96DC9 234 aa5.85□□□□□ -1.47
PDE4D-229ENST00000638939 PCED1BQ96HM7 432 aa5.85□□□□□ -1.47
PDE4D-229ENST00000638939 HPDLQ96IR7 371 aa5.85□□□□□ -1.47
PDE4D-229ENST00000638939 C8orf48Q96LL4 319 aa5.85□□□□□ -1.47
PDE4D-229ENST00000638939 SLITRK1Q96PX8 696 aa5.85□□□□□ -1.47
PDE4D-229ENST00000638939 CYP2S1Q96SQ9 504 aa5.85□□□□□ -1.47
PDE4D-229ENST00000638939 FGFBP2Q9BYJ0 223 aa5.85□□□□□ -1.47
PDE4D-229ENST00000638939 TNMDQ9H2S6 317 aa5.85□□□□□ -1.47
PDE4D-229ENST00000638939 KIAA1586Q9HCI6 787 aa5.85□□□□□ -1.47
PDE4D-229ENST00000638939 CRTAC1Q9NQ79 661 aa5.85□□□□□ -1.47
PDE4D-229ENST00000638939 ZNF358Q9NW07 568 aa5.85□□□□□ -1.47
PDE4D-229ENST00000638939 TRPM5Q9NZQ8 1165 aa5.85□□□□□ -1.47
PDE4D-229ENST00000638939 MAGEC2Q9UBF1 373 aaPredicted RBP5.85□□□□□ -1.47
PDE4D-229ENST00000638939 FCF1Q9Y324 198 aaKnown RBP5.85□□□□□ -1.47
PDE4D-229ENST00000638939 DNMT3AQ9Y6K1 912 aaPredicted RBP5.85□□□□□ -1.47
PDE4D-229ENST00000638939 MYLKQ15746 1914 aa5.85□□□□□ -1.47
PDE4D-229ENST00000638939 KNL1Q8NG31 2342 aa5.85□□□□□ -1.47
PDE4D-229ENST00000638939 A0A087X0B3 334 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 A0A0A0MRY4 1105 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 E2F8A0AVK6 867 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 GOLGA8IPA6NC78 632 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 ZNF233A6NK53 670 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 GOLGA8JA6NMD2 632 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 C1QTNF9BB2RNN3 333 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 PATE3B3GLJ2 98 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 F8VP50 259 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 SGK1O00141 431 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 ADAM23O75077 832 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 ATP2C2O75185 946 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 RTN3O95197 1032 aaPredicted RBP5.84□□□□□ -1.47
PDE4D-229ENST00000638939 KAT7O95251 611 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 KLF8O95600 359 aaPredicted RBP5.84□□□□□ -1.47
PDE4D-229ENST00000638939 APODP05090 189 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 FAM163BP0C2L3 166 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 C1QTNF9P0C862 333 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 HNRNPLP14866 589 aaKnown RBP eCLIP5.84□□□□□ -1.47
PDE4D-229ENST00000638939 ENGP17813 658 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 PDCP20941 246 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 BDNFP23560 247 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 GRIK1P39086 918 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 TNFRSF4P43489 277 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 DHPSP49366 369 aaPredicted RBP5.84□□□□□ -1.47
PDE4D-229ENST00000638939 GDF10P55107 478 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 CYP27A1Q02318 531 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 MESP2Q0VG99 397 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 FOXC1Q12948 553 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 BYSLQ13895 437 aaKnown RBP5.84□□□□□ -1.47
PDE4D-229ENST00000638939 DHCR24Q15392 516 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 DUOXA2Q1HG44 320 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 PREPLQ4J6C6 727 aaPredicted RBP5.84□□□□□ -1.47
PDE4D-229ENST00000638939 C2orf27AQ580R0 203 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 TRIM61Q5EBN2 209 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 SNX30Q5VWJ9 437 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 LYSMD4Q5XG99 296 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 SCARA3Q6AZY7 606 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 CNNM4Q6P4Q7 775 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 SLC23A3Q6PIS1 610 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 LPCAT2Q7L5N7 544 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 TRMT11Q7Z4G4 463 aaKnown RBP5.84□□□□□ -1.47
PDE4D-229ENST00000638939 C12orf40Q86WS4 652 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 CBWD2Q8IUF1 395 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 SYT12Q8IV01 421 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 ETFBKMTQ8IXQ9 262 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 CCDC65Q8IXS2 484 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 ALLCQ8N6M5 410 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 TXNDC5Q8NBS9 432 aaKnown RBP5.84□□□□□ -1.47
PDE4D-229ENST00000638939 OR5B17Q8NGF7 314 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 FAM84AQ96KN4 292 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 FNBP1Q96RU3 617 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 PNKPQ96T60 521 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 NUSAP1Q9BXS6 441 aaKnown RBP5.84□□□□□ -1.47
PDE4D-229ENST00000638939 LINC00597Q9H2U6 94 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 POLMQ9NP87 494 aaPredicted RBP5.84□□□□□ -1.47
PDE4D-229ENST00000638939 TMEM30AQ9NV96 361 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 PANK4Q9NVE7 773 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 HSPBP1Q9NZL4 362 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 TBC1D7Q9P0N9 293 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 TBC1D14Q9P2M4 693 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 R3HCC1Q9Y3T6 440 aaKnown RBP5.84□□□□□ -1.47
PDE4D-229ENST00000638939 NEUROG3Q9Y4Z2 214 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 CPQQ9Y646 472 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 CLIC4Q9Y696 253 aa5.84□□□□□ -1.47
PDE4D-229ENST00000638939 GOLGA4Q13439 2230 aaKnown RBP5.84□□□□□ -1.47
PDE4D-229ENST00000638939 HELZ2Q9BYK8 2649 aaKnown RBP5.84□□□□□ -1.47
PDE4D-229ENST00000638939 ATP8B3O60423 1300 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 TCRBV21S2A2A0A5A6 115 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 FAM92AA1XBS5 289 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 VPS37CA5D8V6 355 aaPredicted RBP5.83□□□□□ -1.48
PDE4D-229ENST00000638939 H0Y626 953 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 AP5Z1O43299 807 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 COCHO43405 550 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 TRIM16O95361 564 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 RPLP1P05386 114 aaKnown RBP5.83□□□□□ -1.48
PDE4D-229ENST00000638939 IDEP14735 1019 aa5.83□□□□□ -1.48
PDE4D-229ENST00000638939 LMO2P25791 158 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms