RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 STK33Q9BYT3 514 aa22.88■■□□□ 1.25
SCN1B-206ENST00000638536 TJP2Q9UDY2 1190 aa22.88■■□□□ 1.25
SCN1B-206ENST00000638536 IRF1P10914 325 aa22.87■■□□□ 1.25
SCN1B-206ENST00000638536 ATP5C1P36542 298 aaKnown RBP22.87■■□□□ 1.25
SCN1B-206ENST00000638536 RPL34P49207 117 aaKnown RBP22.87■■□□□ 1.25
SCN1B-206ENST00000638536 KPNA1P52294 538 aaPredicted RBP22.87■■□□□ 1.25
SCN1B-206ENST00000638536 FZD5Q13467 585 aa22.87■■□□□ 1.25
SCN1B-206ENST00000638536 RUNX3Q13761 415 aa22.87■■□□□ 1.25
SCN1B-206ENST00000638536 NAIF1Q69YI7 327 aaPredicted RBP22.87■■□□□ 1.25
SCN1B-206ENST00000638536 PJA1Q8NG27 643 aa22.87■■□□□ 1.25
SCN1B-206ENST00000638536 SHDQ96IW2 340 aa22.87■■□□□ 1.25
SCN1B-206ENST00000638536 ERGIC2Q96RQ1 377 aa22.87■■□□□ 1.25
SCN1B-206ENST00000638536 NACA2Q9H009 215 aa22.87■■□□□ 1.25
SCN1B-206ENST00000638536 LTB4R2Q9NPC1 389 aa22.87■■□□□ 1.25
SCN1B-206ENST00000638536 RTN4Q9NQC3 1192 aaKnown RBP22.87■■□□□ 1.25
SCN1B-206ENST00000638536 CLIC5Q9NZA1 410 aa22.87■■□□□ 1.25
SCN1B-206ENST00000638536 USP34Q70CQ2 3546 aa22.87■■□□□ 1.25
SCN1B-206ENST00000638536 F8VZ95 297 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 MED7O43513 233 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 DAOAP59103 153 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 PTK2Q05397 1052 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 UBXN2BQ14CS0 331 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 C10orf120Q5SQS8 335 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 CCDC105Q8IYK2 499 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 SIX6OS1Q8N1H7 587 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 HSFY1Q96LI6 401 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 MIS12Q9H081 205 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 ST7Q9NRC1 585 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 DLGAP2Q9P1A6 1054 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 SIT1Q9Y3P8 196 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 FAM170AA1A519 330 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 FAM170BA6NMN3 283 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 SPECC1L-ADORA2AF8WAN1 911 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 GREM1O60565 184 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 CTHP32929 405 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 PSEN1P49768 467 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 JAM2P57087 298 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 ITPRIPL2Q3MIP1 535 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 SCUBE3Q8IX30 993 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 EDEM1Q92611 657 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 SLC4A5Q9BY07 1137 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 ECT2Q9H8V3 914 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 CNGB3Q9NQW8 809 aa22.86■■□□□ 1.25
SCN1B-206ENST00000638536 NDRG2Q9UN36 371 aaKnown RBP22.86■■□□□ 1.25
SCN1B-206ENST00000638536 RFX1P22670 979 aa22.85■■□□□ 1.25
SCN1B-206ENST00000638536 IFNAR2P48551 515 aa22.85■■□□□ 1.25
SCN1B-206ENST00000638536 BSPRYQ5W0U4 402 aa22.85■■□□□ 1.25
SCN1B-206ENST00000638536 ZNF852Q6ZMS4 543 aa22.85■■□□□ 1.25
SCN1B-206ENST00000638536 MIB1Q86YT6 1006 aa22.85■■□□□ 1.25
SCN1B-206ENST00000638536 ZNF276Q8N554 614 aa22.85■■□□□ 1.25
SCN1B-206ENST00000638536 DDX1Q92499 740 aaKnown RBP22.85■■□□□ 1.25
SCN1B-206ENST00000638536 FAM3CQ92520 227 aa22.85■■□□□ 1.25
SCN1B-206ENST00000638536 PCMTD1Q96MG8 357 aaPredicted RBP22.85■■□□□ 1.25
SCN1B-206ENST00000638536 PCDHGC3Q9UN70 934 aa22.85■■□□□ 1.25
SCN1B-206ENST00000638536 RALAP11233 206 aa22.84■■□□□ 1.25
SCN1B-206ENST00000638536 CYP11B1P15538 503 aa22.84■■□□□ 1.25
SCN1B-206ENST00000638536 EFEMP1Q12805 493 aa22.84■■□□□ 1.25
SCN1B-206ENST00000638536 PDGFRLQ15198 375 aa22.84■■□□□ 1.25
SCN1B-206ENST00000638536 MEA1Q16626 185 aa22.84■■□□□ 1.25
SCN1B-206ENST00000638536 KLHDC10Q6PID8 442 aa22.84■■□□□ 1.25
SCN1B-206ENST00000638536 BBS7Q8IWZ6 715 aa22.84■■□□□ 1.25
SCN1B-206ENST00000638536 ADGRG2Q8IZP9 1017 aa22.84■■□□□ 1.25
SCN1B-206ENST00000638536 SCML4Q8N228 414 aa22.84■■□□□ 1.25
SCN1B-206ENST00000638536 FBRSL1Q9HCM7 1045 aaKnown RBP22.84■■□□□ 1.25
SCN1B-206ENST00000638536 DNMT3LQ9UJW3 386 aa22.84■■□□□ 1.25
SCN1B-206ENST00000638536 E5RJQ4 531 aa22.83■■□□□ 1.25
SCN1B-206ENST00000638536 GFPT2O94808 682 aa22.83■■□□□ 1.25
SCN1B-206ENST00000638536 PDCLQ13371 301 aa22.83■■□□□ 1.25
SCN1B-206ENST00000638536 NOP9Q86U38 636 aaKnown RBP22.83■■□□□ 1.25
SCN1B-206ENST00000638536 PIWIL1Q96J94 861 aaKnown RBP22.83■■□□□ 1.25
SCN1B-206ENST00000638536 CPXM1Q96SM3 734 aa22.83■■□□□ 1.25
SCN1B-206ENST00000638536 C8orf33Q9H7E9 229 aaPredicted RBP22.83■■□□□ 1.25
SCN1B-206ENST00000638536 RASAL2Q9UJF2 1139 aa22.83■■□□□ 1.25
SCN1B-206ENST00000638536 A0A1B0GTH6 734 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 E2F8A0AVK6 867 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 PAPSS1O43252 624 aaPredicted RBP22.82■■□□□ 1.24
SCN1B-206ENST00000638536 GJA4P35212 333 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 MLLT6P55198 1093 aaPredicted RBP22.82■■□□□ 1.24
SCN1B-206ENST00000638536 PON2Q15165 354 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 GAB4Q2WGN9 574 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 TAF3Q5VWG9 929 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 BTBD8Q5XKL5 378 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 TMEM110Q86TL2 294 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 ARHGAP18Q8N392 663 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 C1orf131Q8NDD1 294 aaKnown RBP22.82■■□□□ 1.24
SCN1B-206ENST00000638536 NEK11Q8NG66 645 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 STK32AQ8WU08 396 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 SFMBT1Q9UHJ3 866 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 SH3BP1Q9Y3L3 701 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 MAN2B1O00754 1011 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 FYNP06241 537 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 HMBSP08397 361 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 KRT9P35527 623 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 RHBDF2Q6PJF5 856 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 RALGPS2Q86X27 583 aaPredicted RBP22.82■■□□□ 1.24
SCN1B-206ENST00000638536 DDX42Q86XP3 938 aaKnown RBP eCLIP22.82■■□□□ 1.24
SCN1B-206ENST00000638536 PRSS33Q8NF86 280 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 EPS8L1Q8TE68 723 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 SLC20A1Q8WUM9 679 aa22.82■■□□□ 1.24
SCN1B-206ENST00000638536 ATP2A3Q93084 1043 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms