RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 NCAM1P13591 858 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 MIPP30301 263 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 CHRNA3P32297 505 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 BMP8BP34820 402 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 PBX3P40426 434 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 MAGEA10P43363 369 aaPredicted RBP10.77□□□□□ -0.69
LINC00598-216ENST00000638163 FNTAP49354 379 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 SULT1E1P49888 294 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 EPHB3P54753 998 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 EPHB4P54760 987 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 RNASE9P60153 205 aaKnown RBP10.77□□□□□ -0.69
LINC00598-216ENST00000638163 YWHAGP61981 247 aaKnown RBP eCLIP10.77□□□□□ -0.69
LINC00598-216ENST00000638163 DHX34Q14147 1143 aaKnown RBP10.77□□□□□ -0.69
LINC00598-216ENST00000638163 TAF12Q16514 161 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 PABPC1LQ4VXU2 614 aaKnown RBP10.77□□□□□ -0.69
LINC00598-216ENST00000638163 ERMARDQ5T6L9 678 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 SNX30Q5VWJ9 437 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 BSPRYQ5W0U4 402 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 MSANTD2Q6P1R3 559 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 PRSS55Q6UWB4 352 aaPredicted RBP10.77□□□□□ -0.69
LINC00598-216ENST00000638163 RNF19BQ6ZMZ0 732 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 SYDE1Q6ZW31 735 aaPredicted RBP10.77□□□□□ -0.69
LINC00598-216ENST00000638163 BZW1Q7L1Q6 419 aaKnown RBP10.77□□□□□ -0.69
LINC00598-216ENST00000638163 TMC7Q7Z402 723 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 CCDC50Q8IVM0 306 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 DEFB106AQ8N104 65 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 EMC1Q8N766 993 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 KLHL23Q8NBE8 558 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 CMASQ8NFW8 434 aaPredicted RBP10.77□□□□□ -0.69
LINC00598-216ENST00000638163 FAM71BQ8TC56 605 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 CCHCR1Q8TD31 782 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 GRK7Q8WTQ7 553 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 COG1Q8WTW3 980 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.77□□□□□ -0.69
LINC00598-216ENST00000638163 ALG3Q92685 438 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 KHSRPQ92945 711 aaKnown RBP eCLIP10.77□□□□□ -0.69
LINC00598-216ENST00000638163 PPP2R3CQ969Q6 453 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 BTBD6Q96KE9 485 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 CAPZA3Q96KX2 299 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 TMEM209Q96SK2 561 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 SEPT5Q99719 369 aaPredicted RBP10.77□□□□□ -0.69
LINC00598-216ENST00000638163 CLSTN3Q9BQT9 956 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 VN1R3Q9BXE9 311 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 FAM129AQ9BZQ8 928 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 UBE2OQ9C0C9 1292 aaKnown RBP10.77□□□□□ -0.69
LINC00598-216ENST00000638163 PRO3102Q9H379 93 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 SMOC2Q9H3U7 446 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 PLEKHA4Q9H4M7 779 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 RETREG1Q9H6L5 497 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 ZWILCHQ9H900 591 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 TLR9Q9NR96 1032 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 TJP2Q9UDY2 1190 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 MSRAQ9UJ68 235 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 RASAL2Q9UJF2 1139 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 PACSIN2Q9UNF0 486 aaPredicted RBP10.77□□□□□ -0.69
LINC00598-216ENST00000638163 COLQQ9Y215 455 aaPredicted RBP10.77□□□□□ -0.69
LINC00598-216ENST00000638163 USTQ9Y2C2 406 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 PATJQ8NI35 1801 aa10.77□□□□□ -0.69
LINC00598-216ENST00000638163 COL4A4P53420 1690 aaPredicted RBP10.76□□□□□ -0.69
LINC00598-216ENST00000638163 CEP290O15078 2479 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.76□□□□□ -0.69
LINC00598-216ENST00000638163 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.76□□□□□ -0.69
LINC00598-216ENST00000638163 LINC01553A4QN01 128 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 YJEFN3A6XGL0 299 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 E7ENQ6 273 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 M0QYT0 321 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 PRRG1O14668 218 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 GABBR2O75899 941 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 OR4Q2P0C623 313 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 USP17L7P0C7H9 530 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 HOXA9P31269 272 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 CCR1P32246 355 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 CXCR5P32302 372 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 ARL4AP40617 200 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 HCAR3P49019 387 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 ARPP19P56211 112 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 ERVK-21P61565 698 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 OGDHQ02218 1023 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 DEUP1Q05D60 604 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 PPP2R5DQ14738 602 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 DPYSL2Q16555 572 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 TAZQ16635 292 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 CYP1B1Q16678 543 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 EFHC2Q5JST6 749 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 DRICH1Q6PGQ1 229 aaPredicted RBP10.76□□□□□ -0.69
LINC00598-216ENST00000638163 CHRDL2Q6WN34 429 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 PDZD4Q76G19 769 aaPredicted RBP10.76□□□□□ -0.69
LINC00598-216ENST00000638163 SLC13A5Q86YT5 568 aaPredicted RBP10.76□□□□□ -0.69
LINC00598-216ENST00000638163 EIF1ADQ8N9N8 165 aaKnown RBP10.76□□□□□ -0.69
LINC00598-216ENST00000638163 C12orf50Q8NA57 414 aaPredicted RBP10.76□□□□□ -0.69
LINC00598-216ENST00000638163 ATAD1Q8NBU5 361 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 KCTD6Q8NC69 237 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 KRT35Q92764 455 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 FBXO32Q969P5 355 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 CFAP57Q96MR6 1250 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 LPIN3Q9BQK8 851 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 FERMT1Q9BQL6 677 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 MAK16Q9BXY0 300 aaKnown RBP10.76□□□□□ -0.69
LINC00598-216ENST00000638163 OSBPL8Q9BZF1 889 aa10.76□□□□□ -0.69
LINC00598-216ENST00000638163 TRIM7Q9C029 511 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms