RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 PLA2G2CQ5R387 149 aa21.18■□□□□ 0.98
CLN6-222ENST00000637667 HTR3DQ70Z44 454 aa21.18■□□□□ 0.98
CLN6-222ENST00000637667 TMEM25Q86YD3 366 aa21.18■□□□□ 0.98
CLN6-222ENST00000637667 C12orf50Q8NA57 414 aaPredicted RBP21.18■□□□□ 0.98
CLN6-222ENST00000637667 IL17RCQ8NAC3 791 aa21.18■□□□□ 0.98
CLN6-222ENST00000637667 TXNDC5Q8NBS9 432 aaKnown RBP21.18■□□□□ 0.98
CLN6-222ENST00000637667 FBXL13Q8NEE6 735 aa21.18■□□□□ 0.98
CLN6-222ENST00000637667 DUSP16Q9BY84 665 aa21.18■□□□□ 0.98
CLN6-222ENST00000637667 TPSD1Q9BZJ3 242 aa21.18■□□□□ 0.98
CLN6-222ENST00000637667 NMUR1Q9HB89 426 aa21.18■□□□□ 0.98
CLN6-222ENST00000637667 RAB20Q9NX57 234 aa21.18■□□□□ 0.98
CLN6-222ENST00000637667 ACACBO00763 2458 aa21.18■□□□□ 0.98
CLN6-222ENST00000637667 A0A1W2PQH9 124 aa21.17■□□□□ 0.98
CLN6-222ENST00000637667 GREM1O60565 184 aa21.17■□□□□ 0.98
CLN6-222ENST00000637667 TULP3O75386 442 aa21.17■□□□□ 0.98
CLN6-222ENST00000637667 HNRNPLP14866 589 aaKnown RBP eCLIP21.17■□□□□ 0.98
CLN6-222ENST00000637667 KIR2DL1P43626 348 aaPredicted RBP21.17■□□□□ 0.98
CLN6-222ENST00000637667 GOLGA8FQ08AF8 430 aa21.17■□□□□ 0.98
CLN6-222ENST00000637667 GOLGA8DPQ0D2H9 430 aa21.17■□□□□ 0.98
CLN6-222ENST00000637667 BECN1Q14457 450 aa21.17■□□□□ 0.98
CLN6-222ENST00000637667 ANO4Q32M45 955 aa21.17■□□□□ 0.98
CLN6-222ENST00000637667 ZNF394Q53GI3 561 aa21.17■□□□□ 0.98
CLN6-222ENST00000637667 PPP1R26Q5T8A7 1209 aaPredicted RBP21.17■□□□□ 0.98
CLN6-222ENST00000637667 EMC10Q5UCC4 262 aa21.17■□□□□ 0.98
CLN6-222ENST00000637667 KLHDC10Q6PID8 442 aa21.17■□□□□ 0.98
CLN6-222ENST00000637667 TMEM92Q6UXU6 159 aa21.17■□□□□ 0.98
CLN6-222ENST00000637667 TTC39CQ8N584 583 aa21.17■□□□□ 0.98
CLN6-222ENST00000637667 NAT16Q8N8M0 369 aa21.17■□□□□ 0.98
CLN6-222ENST00000637667 HEXIM2Q96MH2 286 aaKnown RBP21.17■□□□□ 0.98
CLN6-222ENST00000637667 GSDMAQ96QA5 445 aa21.17■□□□□ 0.98
CLN6-222ENST00000637667 DEC1Q9P2X7 70 aa21.17■□□□□ 0.98
CLN6-222ENST00000637667 INVSQ9Y283 1065 aa21.17■□□□□ 0.98
CLN6-222ENST00000637667 KIAA1549LQ6ZVL6 1849 aa21.17■□□□□ 0.98
CLN6-222ENST00000637667 MYH10P35580 1976 aa21.17■□□□□ 0.98
CLN6-222ENST00000637667 ABCA7Q8IZY2 2146 aa21.16■□□□□ 0.98
CLN6-222ENST00000637667 EML5Q05BV3 1969 aa21.16■□□□□ 0.98
CLN6-222ENST00000637667 TBC1D3BA6NDS4 549 aa21.16■□□□□ 0.98
CLN6-222ENST00000637667 SGK1O00141 431 aa21.16■□□□□ 0.98
CLN6-222ENST00000637667 ALDH1A2O94788 518 aa21.16■□□□□ 0.98
CLN6-222ENST00000637667 SMC2O95347 1197 aa21.16■□□□□ 0.98
CLN6-222ENST00000637667 RARGP13631 454 aa21.16■□□□□ 0.98
CLN6-222ENST00000637667 GBP1P32455 592 aa21.16■□□□□ 0.98
CLN6-222ENST00000637667 PREPLQ4J6C6 727 aaPredicted RBP21.16■□□□□ 0.98
CLN6-222ENST00000637667 COBLL1Q53SF7 1204 aa21.16■□□□□ 0.98
CLN6-222ENST00000637667 EOGTQ5NDL2 527 aa21.16■□□□□ 0.98
CLN6-222ENST00000637667 ZNF658Q5TYW1 1059 aaPredicted RBP21.16■□□□□ 0.98
CLN6-222ENST00000637667 C11orf74Q86VG3 221 aa21.16■□□□□ 0.98
CLN6-222ENST00000637667 TTC30AQ86WT1 665 aa21.16■□□□□ 0.98
CLN6-222ENST00000637667 ENGASEQ8NFI3 743 aa21.16■□□□□ 0.98
CLN6-222ENST00000637667 MDGA1Q8NFP4 955 aa21.16■□□□□ 0.98
CLN6-222ENST00000637667 TSG101Q99816 390 aa21.16■□□□□ 0.98
CLN6-222ENST00000637667 SMOC1Q9H4F8 434 aa21.16■□□□□ 0.98
CLN6-222ENST00000637667 VPS45Q9NRW7 570 aa21.16■□□□□ 0.98
CLN6-222ENST00000637667 CISHQ9NSE2 258 aa21.16■□□□□ 0.98
CLN6-222ENST00000637667 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.16■□□□□ 0.98
CLN6-222ENST00000637667 DNMT3LQ9UJW3 386 aa21.16■□□□□ 0.98
CLN6-222ENST00000637667 LSM7Q9UK45 103 aaKnown RBP21.16■□□□□ 0.98
CLN6-222ENST00000637667 MDM4O15151 490 aa21.15■□□□□ 0.98
CLN6-222ENST00000637667 SLC16A3O15427 465 aaKnown RBP21.15■□□□□ 0.98
CLN6-222ENST00000637667 LIMK1P53667 647 aa21.15■□□□□ 0.98
CLN6-222ENST00000637667 NUCB2P80303 420 aa21.15■□□□□ 0.98
CLN6-222ENST00000637667 FKBP3Q00688 224 aaKnown RBP21.15■□□□□ 0.98
CLN6-222ENST00000637667 C10orf120Q5SQS8 335 aa21.15■□□□□ 0.98
CLN6-222ENST00000637667 CCDC186Q7Z3E2 898 aa21.15■□□□□ 0.98
CLN6-222ENST00000637667 SCD5Q86SK9 330 aa21.15■□□□□ 0.98
CLN6-222ENST00000637667 ZC3H3Q8IXZ2 948 aaKnown RBP21.15■□□□□ 0.98
CLN6-222ENST00000637667 TMEM176AQ96HP8 235 aa21.15■□□□□ 0.98
CLN6-222ENST00000637667 ARID3AQ99856 593 aa21.15■□□□□ 0.98
CLN6-222ENST00000637667 RXFP3Q9NSD7 469 aa21.15■□□□□ 0.98
CLN6-222ENST00000637667 NAGPAQ9UK23 515 aa21.15■□□□□ 0.98
CLN6-222ENST00000637667 NUDT5Q9UKK9 219 aa21.15■□□□□ 0.98
CLN6-222ENST00000637667 USP3Q9Y6I4 520 aa21.15■□□□□ 0.98
CLN6-222ENST00000637667 MYO18AQ92614 2054 aaKnown RBP21.15■□□□□ 0.98
CLN6-222ENST00000637667 ADAM23O75077 832 aa21.14■□□□□ 0.97
CLN6-222ENST00000637667 PSEN1P49768 467 aa21.14■□□□□ 0.97
CLN6-222ENST00000637667 RAD23BP54727 409 aa21.14■□□□□ 0.97
CLN6-222ENST00000637667 CREB5Q02930 508 aa21.14■□□□□ 0.97
CLN6-222ENST00000637667 CBWD6Q4V339 395 aa21.14■□□□□ 0.97
CLN6-222ENST00000637667 DCAF17Q5H9S7 520 aaPredicted RBP21.14■□□□□ 0.97
CLN6-222ENST00000637667 CBWD3Q5JTY5 395 aa21.14■□□□□ 0.97
CLN6-222ENST00000637667 CBWD5Q5RIA9 395 aa21.14■□□□□ 0.97
CLN6-222ENST00000637667 TCERG1LQ5VWI1 586 aa21.14■□□□□ 0.97
CLN6-222ENST00000637667 PMS2CLQ68D20 193 aa21.14■□□□□ 0.97
CLN6-222ENST00000637667 ANKRD40Q6AI12 368 aa21.14■□□□□ 0.97
CLN6-222ENST00000637667 NUDT18Q6ZVK8 323 aa21.14■□□□□ 0.97
CLN6-222ENST00000637667 TERB1Q8NA31 727 aa21.14■□□□□ 0.97
CLN6-222ENST00000637667 SLC4A11Q8NBS3 891 aa21.14■□□□□ 0.97
CLN6-222ENST00000637667 OLIG1Q8TAK6 271 aa21.14■□□□□ 0.97
CLN6-222ENST00000637667 SPATA20Q8TB22 786 aa21.14■□□□□ 0.97
CLN6-222ENST00000637667 KCNV2Q8TDN2 545 aa21.14■□□□□ 0.97
CLN6-222ENST00000637667 ERCC4Q92889 916 aaPredicted RBP21.14■□□□□ 0.97
CLN6-222ENST00000637667 TATDN2Q93075 761 aa21.14■□□□□ 0.97
CLN6-222ENST00000637667 SMARCE1Q969G3 411 aa21.14■□□□□ 0.97
CLN6-222ENST00000637667 FAM124BQ9H5Z6 455 aaPredicted RBP21.14■□□□□ 0.97
CLN6-222ENST00000637667 POLMQ9NP87 494 aaPredicted RBP21.14■□□□□ 0.97
CLN6-222ENST00000637667 ZDHHC4Q9NPG8 344 aa21.14■□□□□ 0.97
CLN6-222ENST00000637667 EPG5Q9HCE0 2579 aa21.14■□□□□ 0.97
CLN6-222ENST00000637667 GON4LQ3T8J9 2241 aa21.13■□□□□ 0.97
CLN6-222ENST00000637667 BCLAF3A2AJT9 711 aaKnown RBP21.13■□□□□ 0.97
CLN6-222ENST00000637667 RALAP11233 206 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms