RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 TXNDC16Q9P2K2 825 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 ZNF212Q9UDV6 495 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 FBXO40Q9UH90 709 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 XPO7Q9UIA9 1087 aaKnown RBP4.14□□□□□ -1.75
SCN1A-214ENST00000637038 DCTN4Q9UJW0 460 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 SORCS3Q9UPU3 1222 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 ATP11BQ9Y2G3 1177 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 CAPN9O14815 690 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 ZBED1O96006 694 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 C4BPAP04003 597 aaKnown RBP4.14□□□□□ -1.75
SCN1A-214ENST00000637038 WEE2P0C1S8 567 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 RPA3P35244 121 aaPredicted RBP4.14□□□□□ -1.75
SCN1A-214ENST00000637038 PGM1P36871 562 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 SERPINB4P48594 390 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 ACOT2P49753 483 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 ACTR2P61160 394 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 DYNLT1P63172 113 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 TMPRSS15P98073 1019 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 TNFAIP2Q03169 654 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 BAATQ14032 418 aaPredicted RBP4.14□□□□□ -1.75
SCN1A-214ENST00000637038 LBRQ14739 615 aaKnown RBP4.14□□□□□ -1.75
SCN1A-214ENST00000637038 MAPK6Q16659 721 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 TRMT5Q32P41 509 aaKnown RBP4.14□□□□□ -1.75
SCN1A-214ENST00000637038 TMEM63BQ5T3F8 832 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 TDRD10Q5VZ19 366 aaKnown RBP4.14□□□□□ -1.75
SCN1A-214ENST00000637038 PDE12Q6L8Q7 609 aaKnown RBP4.14□□□□□ -1.75
SCN1A-214ENST00000637038 GPAT2Q6NUI2 795 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 VSIG10LQ86VR7 867 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 SLC26A11Q86WA9 606 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 WDR75Q8IWA0 830 aaKnown RBP4.14□□□□□ -1.75
SCN1A-214ENST00000637038 ENDOVQ8N8Q3 282 aaKnown RBP4.14□□□□□ -1.75
SCN1A-214ENST00000637038 ZNF606Q8WXB4 792 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 CLEC4DQ8WXI8 215 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 PRCCQ92733 491 aaPredicted RBP4.14□□□□□ -1.75
SCN1A-214ENST00000637038 TTC17Q96AE7 1141 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 LRRC39Q96DD0 335 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 GLT1D1Q96MS3 346 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 RILPQ96NA2 401 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 OLFM3Q96PB7 478 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 TRIM4Q9C037 500 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 MFSD1Q9H3U5 465 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 Q9H521 79 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 RPAP3Q9H6T3 665 aaPredicted RBP4.14□□□□□ -1.75
SCN1A-214ENST00000637038 KCNK4Q9NYG8 393 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 IL1RAPL1Q9NZN1 696 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 MID2Q9UJV3 735 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 UMODL1Q5DID0 1318 aa4.14□□□□□ -1.75
SCN1A-214ENST00000637038 WDR91A4D1P6 747 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 MAGEA13PA6NCF6 341 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 APOC4-APOC2K7ER74 178 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 TRDMT1O14717 391 aaKnown RBP4.13□□□□□ -1.75
SCN1A-214ENST00000637038 SPTLC1O15269 473 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 NCAM2O15394 837 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 CST8O60676 142 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 GH1P01241 217 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 APOC2P02655 101 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 RARBP10826 455 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 NAT2P11245 290 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 KRT10P13645 584 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 FOXN2P32314 431 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 WDR4P57081 412 aaKnown RBP4.13□□□□□ -1.75
SCN1A-214ENST00000637038 SESN3P58005 492 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 CLDN10P78369 228 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 TFAMQ00059 246 aaKnown RBP4.13□□□□□ -1.75
SCN1A-214ENST00000637038 OTUD4Q01804 1114 aaKnown RBP4.13□□□□□ -1.75
SCN1A-214ENST00000637038 SLC34A1Q06495 639 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 CDK18Q07002 472 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 MXD4Q14582 209 aaPredicted RBP4.13□□□□□ -1.75
SCN1A-214ENST00000637038 UGCGQ16739 394 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 GSTA3Q16772 222 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 SNRNP48Q6IEG0 339 aaKnown RBP4.13□□□□□ -1.75
SCN1A-214ENST00000637038 SLC30A9Q6PML9 568 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 ADGRD1Q6QNK2 874 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 ANO5Q75V66 913 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 MTDHQ86UE4 582 aaKnown RBP4.13□□□□□ -1.75
SCN1A-214ENST00000637038 LSM14AQ8ND56 463 aaKnown RBP4.13□□□□□ -1.75
SCN1A-214ENST00000637038 FAM13CQ8NE31 585 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 FBXO36Q8NEA4 188 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 IL31RAQ8NI17 732 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 C10orf82Q8WW14 230 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 ADPGKQ9BRR6 497 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 CENPKQ9BS16 269 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 FAM167BQ9BTA0 163 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 CALN1Q9BXU9 219 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 FAM124BQ9H5Z6 455 aaPredicted RBP4.13□□□□□ -1.75
SCN1A-214ENST00000637038 ACP6Q9NPH0 428 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 KLHL11Q9NVR0 708 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 NDE1Q9NXR1 346 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 PPARGC1AQ9UBK2 798 aaKnown RBP4.13□□□□□ -1.75
SCN1A-214ENST00000637038 HEY2Q9UBP5 337 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 SIGLEC16A6NMB1 481 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 H0Y3Z8 333 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 GOLGA8MH3BSY2 632 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 PDHXO00330 501 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 OGTO15294 1046 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 CHADO15335 359 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 AHCYL1O43865 530 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 DNAJC6O75061 913 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 TOM1L1O75674 476 aa4.13□□□□□ -1.75
SCN1A-214ENST00000637038 KLHL2O95198 593 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms