RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 RXFP2Q8WXD0 754 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 CFAP57Q96MR6 1250 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 PPP1R10Q96QC0 940 aaKnown RBP12.01□□□□□ -0.49
CLN6-217ENST00000636964 PAAF1Q9BRP4 392 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 FAM167BQ9BTA0 163 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 RALGAPA2Q2PPJ7 1873 aa12□□□□□ -0.49
CLN6-217ENST00000636964 CASTOR2A6NHX0 329 aa12□□□□□ -0.49
CLN6-217ENST00000636964 CYB561D2O14569 222 aa12□□□□□ -0.49
CLN6-217ENST00000636964 RTN3O95197 1032 aaPredicted RBP12□□□□□ -0.49
CLN6-217ENST00000636964 MIPP30301 263 aa12□□□□□ -0.49
CLN6-217ENST00000636964 CLCNKBP51801 687 aa12□□□□□ -0.49
CLN6-217ENST00000636964 NCALDP61601 193 aa12□□□□□ -0.49
CLN6-217ENST00000636964 SLC25A11Q02978 314 aaKnown RBP12□□□□□ -0.49
CLN6-217ENST00000636964 MGAT3Q09327 533 aa12□□□□□ -0.49
CLN6-217ENST00000636964 PAN2Q504Q3 1202 aaKnown RBP12□□□□□ -0.49
CLN6-217ENST00000636964 AGMOQ6ZNB7 445 aa12□□□□□ -0.49
CLN6-217ENST00000636964 TMC3Q7Z5M5 1100 aa12□□□□□ -0.49
CLN6-217ENST00000636964 NIPA2Q8N8Q9 360 aa12□□□□□ -0.49
CLN6-217ENST00000636964 SLC2A14Q8TDB8 520 aa12□□□□□ -0.49
CLN6-217ENST00000636964 P3H4Q92791 437 aa12□□□□□ -0.49
CLN6-217ENST00000636964 EPB41L4BQ9H329 900 aa12□□□□□ -0.49
CLN6-217ENST00000636964 CREBZFQ9NS37 354 aa12□□□□□ -0.49
CLN6-217ENST00000636964 ARL5CA6NH57 179 aa12□□□□□ -0.49
CLN6-217ENST00000636964 CLDN5O00501 218 aa12□□□□□ -0.49
CLN6-217ENST00000636964 LCP1P13796 627 aa12□□□□□ -0.49
CLN6-217ENST00000636964 CETN2P41208 172 aa12□□□□□ -0.49
CLN6-217ENST00000636964 RABGGTBP53611 331 aa12□□□□□ -0.49
CLN6-217ENST00000636964 SV2CQ496J9 727 aa12□□□□□ -0.49
CLN6-217ENST00000636964 PKDCCQ504Y2 493 aa12□□□□□ -0.49
CLN6-217ENST00000636964 FAM182AQ5T1J6 154 aa12□□□□□ -0.49
CLN6-217ENST00000636964 LRRC34Q8IZ02 419 aa12□□□□□ -0.49
CLN6-217ENST00000636964 SLC35F5Q8WV83 523 aa12□□□□□ -0.49
CLN6-217ENST00000636964 RBM41Q96IZ5 413 aaKnown RBP12□□□□□ -0.49
CLN6-217ENST00000636964 TRIM4Q9C037 500 aa12□□□□□ -0.49
CLN6-217ENST00000636964 C10orf88Q9H8K7 445 aa12□□□□□ -0.49
CLN6-217ENST00000636964 PIDD1Q9HB75 910 aa12□□□□□ -0.49
CLN6-217ENST00000636964 GDAP2Q9NXN4 497 aa12□□□□□ -0.49
CLN6-217ENST00000636964 GOLGA6L10A6NI86 522 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 GPR182O15218 404 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 RNF8O76064 485 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 POMCP01189 267 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 SHBGP04278 402 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 SCYL2Q6P3W7 929 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 GSTA5Q7RTV2 222 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 HOOK3Q86VS8 718 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 UNC93AQ86WB7 457 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 CCDC25Q86WR0 208 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 EIF1ADQ8N9N8 165 aaKnown RBP11.99□□□□□ -0.49
CLN6-217ENST00000636964 CCDC197Q8NCU1 140 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 MAIP1Q8WWC4 291 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 NDRG1Q92597 394 aaKnown RBP11.99□□□□□ -0.49
CLN6-217ENST00000636964 LRRC45Q96CN5 670 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 DNAJC17Q9NVM6 304 aaKnown RBP11.99□□□□□ -0.49
CLN6-217ENST00000636964 DNPEPQ9ULA0 475 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 INPP5FQ9Y2H2 1132 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 I3L4J1 428 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 PAPSS1O43252 624 aaPredicted RBP11.99□□□□□ -0.49
CLN6-217ENST00000636964 THP07101 528 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 KRT16P08779 473 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 TKTP29401 623 aaKnown RBP11.99□□□□□ -0.49
CLN6-217ENST00000636964 STIP1P31948 543 aaKnown RBP11.99□□□□□ -0.49
CLN6-217ENST00000636964 PNPLA4P41247 253 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 SCNN1BP51168 640 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 ACLYP53396 1101 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 PLCB3Q01970 1234 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 HADHQ16836 314 aaKnown RBP11.99□□□□□ -0.49
CLN6-217ENST00000636964 TFDP3Q5H9I0 405 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 LRRC38Q5VT99 294 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 C3orf58Q8NDZ4 430 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.99□□□□□ -0.493e-10■■■■■ 88.3
CLN6-217ENST00000636964 RSPH1Q8WYR4 309 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 TRPV6Q9H1D0 765 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 HOMER3Q9NSC5 361 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 USP18Q9UMW8 372 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 TMEM98Q9Y2Y6 226 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 hCG_1818297A0A087WSY0 165 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 DYTNA2CJ06 578 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 UBOX5O94941 541 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 GSTA1P08263 222 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 CHN1P15882 459 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 GPD1P21695 349 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 CDKN2BP42772 138 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 LPIN1Q14693 890 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 STILQ15468 1287 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 CCNG2Q16589 344 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 RNF180Q86T96 592 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 GLIS1Q8NBF1 620 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 PCSK9Q8NBP7 692 aaKnown RBP11.99□□□□□ -0.49
CLN6-217ENST00000636964 KCTD6Q8NC69 237 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 PWWP2AQ96N64 755 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 PEBP4Q96S96 227 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 ADAM2Q99965 735 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 NGRNQ9NPE2 291 aaKnown RBP11.99□□□□□ -0.49
CLN6-217ENST00000636964 TRIM33Q9UPN9 1127 aa11.99□□□□□ -0.49
CLN6-217ENST00000636964 C2CD4BA6NLJ0 364 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 TJP3O95049 919 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 ETS1P14921 441 aa11.98□□□□□ -0.49
CLN6-217ENST00000636964 NQO1P15559 274 aaKnown RBP11.98□□□□□ -0.49
CLN6-217ENST00000636964 TFE3P19532 575 aaPredicted RBP11.98□□□□□ -0.49
CLN6-217ENST00000636964 ADCY8P40145 1251 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms