RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 SCML2Q9UQR0 700 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 USTQ9Y2C2 406 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 MYOFQ9NZM1 2061 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 CCDC195A0A1B0GUA6 201 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 FAM92AA1XBS5 289 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 C2orf78A6NCI8 922 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 BTNL10A8MVZ5 291 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 ESPNB1AK53 854 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 ENC1O14682 589 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 MSI1O43347 362 aaKnown RBP11.16□□□□□ -0.62
CLN5-213ENST00000636681 MYL4P12829 197 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 PDGFRAP16234 1089 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 MARCKSL1P49006 195 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 DNA2P51530 1060 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 EPHB3P54753 998 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 TAS2R40P59535 323 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 YWHAZP63104 245 aaKnown RBP11.16□□□□□ -0.62
CLN5-213ENST00000636681 SLC5A9Q2M3M2 681 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 ZNF662Q6ZS27 426 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 MYLIPQ8WY64 445 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 PSMG2Q969U7 264 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 ACSF2Q96CM8 615 aaPredicted RBP11.16□□□□□ -0.62
CLN5-213ENST00000636681 TRIM11Q96F44 468 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 CYP2S1Q96SQ9 504 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 TTLL2Q9BWV7 592 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 NSUN3Q9H649 340 aaKnown RBP11.16□□□□□ -0.62
CLN5-213ENST00000636681 LUC7LQ9NQ29 371 aaKnown RBP11.16□□□□□ -0.62
CLN5-213ENST00000636681 WDR35Q9P2L0 1181 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 HSFX1Q9UBD0 423 aa11.16□□□□□ -0.62
CLN5-213ENST00000636681 A0A0A6YYK5 440 aaPredicted RBP11.15□□□□□ -0.62
CLN5-213ENST00000636681 TBX10O75333 385 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 MTA2O94776 668 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 RTN3O95197 1032 aaPredicted RBP11.15□□□□□ -0.62
CLN5-213ENST00000636681 F11P03951 625 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 CSH1P0DML2 217 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 CSH2P0DML3 217 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 NCAM1P13591 858 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 CCDC85BQ15834 202 aaPredicted RBP11.15□□□□□ -0.62
CLN5-213ENST00000636681 TAF12Q16514 161 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 ATP13A4Q4VNC1 1196 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 RARS2Q5T160 578 aaKnown RBP11.15□□□□□ -0.62
CLN5-213ENST00000636681 SYCE2Q6PIF2 218 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 EP400NLQ6ZTU2 488 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 CCDC149Q6ZUS6 474 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 NYAP1Q6ZVC0 841 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 GRASPQ7Z6J2 395 aaPredicted RBP11.15□□□□□ -0.62
CLN5-213ENST00000636681 DAAM2Q86T65 1068 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 RHOT2Q8IXI1 618 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 CASP10Q92851 521 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 WBP2Q969T9 261 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 SLC2A13Q96QE2 648 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 ANLNQ9NQW6 1124 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 UVRAGQ9P2Y5 699 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 SCINQ9Y6U3 715 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 TRIOO75962 3097 aa11.15□□□□□ -0.62
CLN5-213ENST00000636681 A0A1W2PRU2 124 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 SPDYE4A6NLX3 237 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 I6L893 689 aaPredicted RBP11.14□□□□□ -0.63
CLN5-213ENST00000636681 SCAMP3O14828 347 aaKnown RBP11.14□□□□□ -0.63
CLN5-213ENST00000636681 HSF2BPO75031 334 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 MOSPD3O75425 235 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 DAB1O75553 588 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 FBXO21O94952 628 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 RARGP13631 454 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 GPD1P21695 349 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 COMTP21964 271 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 PSMA2P25787 234 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 MSNP26038 577 aaKnown RBP11.14□□□□□ -0.63
CLN5-213ENST00000636681 GABRR2P28476 465 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 GJC1P36383 396 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 GNG11P61952 73 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 VEPH1Q14D04 833 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 TCEAL1Q15170 157 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 CLUL1Q15846 466 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 EFHC1Q5JVL4 640 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 BTBD8Q5XKL5 378 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 TXNDC8Q6A555 127 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 SYT10Q6XYQ8 523 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 TAC4Q86UU9 113 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 ING5Q8WYH8 240 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 KRT35Q92764 455 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 MYRFLQ96LU7 910 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 ZNF512Q96ME7 567 aaPredicted RBP11.14□□□□□ -0.63
CLN5-213ENST00000636681 PEBP4Q96S96 227 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 DDX23Q9BUQ8 820 aaKnown RBP11.14□□□□□ -0.63
CLN5-213ENST00000636681 RNF38Q9H0F5 515 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 FBXO44Q9H4M3 255 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 PLEKHA4Q9H4M7 779 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 POPDC2Q9HBU9 364 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 MRPL47Q9HD33 250 aaKnown RBP11.14□□□□□ -0.63
CLN5-213ENST00000636681 KLHL11Q9NVR0 708 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.14□□□□□ -0.63
CLN5-213ENST00000636681 CLEC1BQ9P126 229 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 ALG6Q9Y672 507 aa11.14□□□□□ -0.63
CLN5-213ENST00000636681 ZNF840PA6NDX5 716 aa11.13□□□□□ -0.63
CLN5-213ENST00000636681 MYO1FO00160 1098 aa11.13□□□□□ -0.63
CLN5-213ENST00000636681 PROSCO94903 275 aa11.13□□□□□ -0.63
CLN5-213ENST00000636681 HMBSP08397 361 aa11.13□□□□□ -0.63
CLN5-213ENST00000636681 ZDHHC11BP0C7U3 371 aa11.13□□□□□ -0.63
CLN5-213ENST00000636681 IL1R2P27930 398 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms