RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 OR52M1Q8NGK5 317 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 NCSTNQ92542 709 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 C11orf24Q96F05 449 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-213ENST00000630925 LRCH3Q96II8 777 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 MAML3Q96JK9 1138 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 P2RX7Q99572 595 aaKnown RBP5.11□□□□□ -1.59
SDCBP-213ENST00000630925 REEP2Q9BRK0 252 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 SLC4A5Q9BY07 1137 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 ABCG8Q9H221 673 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 DPH5Q9H2P9 285 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 PABPC3Q9H361 631 aaKnown RBP5.11□□□□□ -1.59
SDCBP-213ENST00000630925 C17orf75Q9HAS0 396 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 SEPSECSQ9HD40 501 aaKnown RBP5.11□□□□□ -1.59
SDCBP-213ENST00000630925 A1CFQ9NQ94 594 aaKnown RBP5.11□□□□□ -1.59
SDCBP-213ENST00000630925 SOHLH2Q9NX45 425 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 STK32BQ9NY57 414 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 COL20A1Q9P218 1284 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 KLHL3Q9UH77 587 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 MBD1Q9UIS9 605 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-213ENST00000630925 TSPYL4Q9UJ04 414 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 AKT3Q9Y243 479 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 PRELID1Q9Y255 219 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 SNX9Q9Y5X1 595 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 GPC6Q9Y625 555 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-213ENST00000630925 NDUFS8O00217 210 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 PSMD9O00233 223 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 PDE2AO00408 941 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-213ENST00000630925 IFIT3O14879 490 aaKnown RBP5.11□□□□□ -1.59
SDCBP-213ENST00000630925 ZNF263O14978 683 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 PIP5K1BO14986 540 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 CD3EAPO15446 510 aaKnown RBP5.11□□□□□ -1.59
SDCBP-213ENST00000630925 CACNG3O60359 315 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 PRAMEF12O95522 483 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 NDST3O95803 873 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 ADH1CP00326 375 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 ALBP02768 609 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 FGF4P08620 206 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 BRAFP15056 766 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 SLC9A1P19634 815 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 RNF144AP50876 292 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-213ENST00000630925 HSD17B4P51659 736 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 PRELPP51888 382 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 FAM189BP81408 668 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 LMAN2Q12907 356 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 PRICKLE4Q2TBC4 344 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 TBC1D25Q3MII6 688 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 CYP27C1Q4G0S4 372 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 ARHGAP15Q53QZ3 475 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 WIPI1Q5MNZ9 446 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-213ENST00000630925 COL13A1Q5TAT6 717 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-213ENST00000630925 KANK2Q63ZY3 851 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 CYP20A1Q6UW02 462 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 CEP128Q6ZU80 1094 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 ADAT2Q7Z6V5 191 aaKnown RBP5.11□□□□□ -1.59
SDCBP-213ENST00000630925 MRPL10Q7Z7H8 261 aaKnown RBP5.11□□□□□ -1.59
SDCBP-213ENST00000630925 DNAJC10Q8IXB1 793 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 CCDC105Q8IYK2 499 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 PHACTR4Q8IZ21 702 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 ZNF321PQ8N8H1 164 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 KCNH5Q8NCM2 988 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 IP6K1Q92551 441 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 CDKL2Q92772 493 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 ALG14Q96F25 216 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 RCC1LQ96I51 464 aaKnown RBP5.11□□□□□ -1.59
SDCBP-213ENST00000630925 SPSB2Q99619 263 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 APOL6Q9BWW8 343 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 TEX12Q9BXU0 123 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 KCNH6Q9H252 994 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 CBX8Q9HC52 389 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 IL1RAPL2Q9NP60 686 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 SH2B1Q9NRF2 756 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-213ENST00000630925 HCFC1R1Q9NWW0 138 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 CACNA2D2Q9NY47 1150 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 PI4KBQ9UBF8 816 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 CNOT11Q9UKZ1 510 aaKnown RBP5.11□□□□□ -1.59
SDCBP-213ENST00000630925 LYVE1Q9Y5Y7 322 aa5.11□□□□□ -1.59
SDCBP-213ENST00000630925 TIAM1Q13009 1591 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 UGGT1Q9NYU2 1555 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 A8MV72 311 aaPredicted RBP5.1□□□□□ -1.59
SDCBP-213ENST00000630925 RSPH10B2B2RC85 870 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 E2F3O00716 465 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 TO15178 435 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 HNRNPRO43390 633 aaKnown RBP5.1□□□□□ -1.59
SDCBP-213ENST00000630925 CNPP09543 421 aaKnown RBP5.1□□□□□ -1.59
SDCBP-213ENST00000630925 RSPH10BP0C881 870 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 PTAFRP25105 342 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 CHMLP26374 656 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 RPA1P27694 616 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 CSTF2P33240 577 aaKnown RBP eCLIP5.1□□□□□ -1.59
SDCBP-213ENST00000630925 NF2P35240 595 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 PPARGP37231 505 aaPredicted RBP5.1□□□□□ -1.59
SDCBP-213ENST00000630925 ADARP55265 1226 aaKnown RBP5.1□□□□□ -1.59
SDCBP-213ENST00000630925 RPS3AP61247 264 aaKnown RBP5.1□□□□□ -1.59
SDCBP-213ENST00000630925 TUBA1BP68363 451 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 SH3BP2P78314 561 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 TBC1D8BQ0IIM8 1120 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 NPRL3Q12980 569 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 SQLEQ14534 574 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 CCDC142Q17RM4 750 aa5.1□□□□□ -1.59
SDCBP-213ENST00000630925 RRAGBQ5VZM2 374 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms