RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 C1orf216Q8TAB5 229 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 MYLPFQ96A32 169 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 OTUB2Q96DC9 234 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 LGMNQ99538 433 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 RAB34Q9BZG1 259 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 NRSN2Q9GZP1 204 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 MKRN2Q9H000 416 aaKnown RBP12.69□□□□□ -0.38
CHD2-218ENST00000629346 USP36Q9P275 1121 aaKnown RBP12.69□□□□□ -0.38
CHD2-218ENST00000629346 SNX9Q9Y5X1 595 aa12.69□□□□□ -0.38
CHD2-218ENST00000629346 COL5A1P20908 1838 aaPredicted RBP12.69□□□□□ -0.38
CHD2-218ENST00000629346 KNL1Q8NG31 2342 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 NEDD8-MDP1E9PL57 170 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 PCDHGA12O60330 932 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 PIGRP01833 764 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 PLCG1P19174 1290 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 LMO2P25791 158 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 PCSK1P29120 753 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 ACTN2P35609 894 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 PPP3CCP48454 512 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 LHX1P48742 406 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 CCT8P50990 548 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 ORC2Q13416 577 aaPredicted RBP12.68□□□□□ -0.38
CHD2-218ENST00000629346 GNL2Q13823 731 aaKnown RBP12.68□□□□□ -0.38
CHD2-218ENST00000629346 STARD3Q14849 445 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 TEAD4Q15561 434 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 TDRD10Q5VZ19 366 aaKnown RBP12.68□□□□□ -0.38
CHD2-218ENST00000629346 FAM171BQ6P995 826 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 VSTM1Q6UX27 236 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 METTL3Q86U44 580 aaKnown RBP12.68□□□□□ -0.38
CHD2-218ENST00000629346 SYT2Q8N9I0 419 aaPredicted RBP12.68□□□□□ -0.38
CHD2-218ENST00000629346 KRI1Q8N9T8 703 aaKnown RBP12.68□□□□□ -0.38
CHD2-218ENST00000629346 WBP2Q969T9 261 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 WBP1Q96G27 269 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 FAM84AQ96KN4 292 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 SLITRK1Q96PX8 696 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 TTLL2Q9BWV7 592 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 TRIM4Q9C037 500 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 EHD2Q9NZN4 543 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 AGO2Q9UKV8 859 aaKnown RBP12.68□□□□□ -0.38
CHD2-218ENST00000629346 STON1Q9Y6Q2 735 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 MYH11P35749 1972 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 TEX15Q9BXT5 2789 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 CABIN1Q9Y6J0 2220 aa12.68□□□□□ -0.38
CHD2-218ENST00000629346 USP9XQ93008 2570 aaPredicted RBP12.67□□□□□ -0.38
CHD2-218ENST00000629346 F8VP50 259 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 ENC1O14682 589 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 COCHO43405 550 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 LDOC1O95751 146 aaPredicted RBP12.67□□□□□ -0.38
CHD2-218ENST00000629346 KRT19P08727 400 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 PDGFRBP09619 1106 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 ACADMP11310 421 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 TYRP14679 529 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 OXTRP30559 389 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 CSRP3P50461 194 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 INAVAQ3KP66 663 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 KCNT1Q5JUK3 1230 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 PRAMEF14Q5SWL7 426 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 TPGS1Q6ZTW0 290 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 GATAD2AQ86YP4 633 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 TMPRSS6Q8IU80 811 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 MYCT1Q8N699 235 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 CSGALNACT2Q8N6G5 542 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 BHMTQ93088 406 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 IGSF8Q969P0 613 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 SIPA1Q96FS4 1042 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 XPO6Q96QU8 1125 aaKnown RBP12.67□□□□□ -0.38
CHD2-218ENST00000629346 SYT15Q9BQS2 421 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 MMTAG2Q9BU76 263 aaKnown RBP12.67□□□□□ -0.38
CHD2-218ENST00000629346 NUP58Q9BVL2 599 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 BBS2Q9BXC9 721 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 TRIM9Q9C026 710 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 C6orf106Q9H6K1 298 aaPredicted RBP12.67□□□□□ -0.38
CHD2-218ENST00000629346 CRTAC1Q9NQ79 661 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 PCDHGA1Q9Y5H4 931 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 TMEM131Q92545 1883 aa12.67□□□□□ -0.38
CHD2-218ENST00000629346 GFRA2O00451 464 aa12.66□□□□□ -0.38
CHD2-218ENST00000629346 GABRDO14764 452 aa12.66□□□□□ -0.38
CHD2-218ENST00000629346 RFPL3O75679 317 aa12.66□□□□□ -0.38
CHD2-218ENST00000629346 TRAPPC10P48553 1259 aa12.66□□□□□ -0.38
CHD2-218ENST00000629346 SLC12A3P55017 1021 aa12.66□□□□□ -0.38
CHD2-218ENST00000629346 TMPRSS3P57727 454 aa12.66□□□□□ -0.38
CHD2-218ENST00000629346 NOP14P78316 857 aaKnown RBP12.66□□□□□ -0.38
CHD2-218ENST00000629346 IL17AQ16552 155 aa12.66□□□□□ -0.38
CHD2-218ENST00000629346 SOWAHAQ2M3V2 549 aa12.66□□□□□ -0.38
CHD2-218ENST00000629346 ARSHQ5FYA8 562 aa12.66□□□□□ -0.38
CHD2-218ENST00000629346 COLEC12Q5KU26 742 aa12.66□□□□□ -0.38
CHD2-218ENST00000629346 BROXQ5VW32 411 aa12.66□□□□□ -0.38
CHD2-218ENST00000629346 CRELD2Q6UXH1 353 aaPredicted RBP12.66□□□□□ -0.38
CHD2-218ENST00000629346 HS2ST1Q7LGA3 356 aa12.66□□□□□ -0.38
CHD2-218ENST00000629346 ERICH1Q86X53 443 aa12.66□□□□□ -0.38
CHD2-218ENST00000629346 C1orf127Q8N9H9 656 aa12.66□□□□□ -0.38
CHD2-218ENST00000629346 PRCCQ92733 491 aaPredicted RBP12.66□□□□□ -0.38
CHD2-218ENST00000629346 CNDP2Q96KP4 475 aaKnown RBP12.66□□□□□ -0.38
CHD2-218ENST00000629346 IKZF4Q9H2S9 585 aa12.66□□□□□ -0.38
CHD2-218ENST00000629346 ZHX3Q9H4I2 956 aa12.66□□□□□ -0.38
CHD2-218ENST00000629346 TM9SF3Q9HD45 589 aa12.66□□□□□ -0.38
CHD2-218ENST00000629346 CHORDC1Q9UHD1 332 aaPredicted RBP12.66□□□□□ -0.38
CHD2-218ENST00000629346 IL17BQ9UHF5 180 aa12.66□□□□□ -0.38
CHD2-218ENST00000629346 NOL7Q9UMY1 257 aaKnown RBP12.66□□□□□ -0.38
CHD2-218ENST00000629346 KIF3AQ9Y496 699 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms