RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 DUSP16Q9BY84 665 aa17.32■□□□□ 0.36
LINC00628-201ENST00000628516 PNPLA8Q9NP80 782 aa17.32■□□□□ 0.36
LINC00628-201ENST00000628516 CYLDQ9NQC7 956 aa17.32■□□□□ 0.36
LINC00628-201ENST00000628516 SPHK2Q9NRA0 654 aa17.32■□□□□ 0.36
LINC00628-201ENST00000628516 OSER1Q9NX31 292 aa17.32■□□□□ 0.36
LINC00628-201ENST00000628516 KIAA1468Q9P260 1216 aa17.32■□□□□ 0.36
LINC00628-201ENST00000628516 MMP17Q9ULZ9 603 aa17.32■□□□□ 0.36
LINC00628-201ENST00000628516 KIAA1549LQ6ZVL6 1849 aa17.32■□□□□ 0.36
LINC00628-201ENST00000628516 SPAG17Q6Q759 2223 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 A0A1W2PQH9 124 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 DCDC2BA2VCK2 349 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 GDF9O60383 454 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 FOXD2O60548 495 aaPredicted RBP17.31■□□□□ 0.36
LINC00628-201ENST00000628516 MBD3O95983 291 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 RARGP13631 454 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 KIF11P52732 1056 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 FKBP3Q00688 224 aaKnown RBP17.31■□□□□ 0.36
LINC00628-201ENST00000628516 GOLGA8FQ08AF8 430 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 GOLGA8DPQ0D2H9 430 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 CRY1Q16526 586 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 COBLL1Q53SF7 1204 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 EMC10Q5UCC4 262 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 ANKRD40Q6AI12 368 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 ANO7Q6IWH7 933 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 TTC30AQ86WT1 665 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 TTC39CQ8N584 583 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 ALLCQ8N6M5 410 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 TXNDC5Q8NBS9 432 aaKnown RBP17.31■□□□□ 0.36
LINC00628-201ENST00000628516 TATDN2Q93075 761 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 FAXDC2Q96IV6 333 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 DUSP9Q99956 384 aaKnown RBP17.31■□□□□ 0.36
LINC00628-201ENST00000628516 KLF16Q9BXK1 252 aaPredicted RBP17.31■□□□□ 0.36
LINC00628-201ENST00000628516 TPSD1Q9BZJ3 242 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 NMUR1Q9HB89 426 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 CISHQ9NSE2 258 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 LSM7Q9UK45 103 aaKnown RBP17.31■□□□□ 0.36
LINC00628-201ENST00000628516 NUDT5Q9UKK9 219 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 INVSQ9Y283 1065 aa17.31■□□□□ 0.36
LINC00628-201ENST00000628516 EML5Q05BV3 1969 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 A0A0A0MRY4 1105 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 TRIM49BA6NDI0 452 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 TBC1D3BA6NDS4 549 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 MDM4O15151 490 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 SLC16A3O15427 465 aaKnown RBP17.3■□□□□ 0.36
LINC00628-201ENST00000628516 HOXC11O43248 304 aaPredicted RBP17.3■□□□□ 0.36
LINC00628-201ENST00000628516 KLF8O95600 359 aaPredicted RBP17.3■□□□□ 0.36
LINC00628-201ENST00000628516 BMP6P22004 513 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 GBP1P32455 592 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 TNFRSF4P43489 277 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 PMS1P54277 932 aaKnown RBP17.3■□□□□ 0.36
LINC00628-201ENST00000628516 MORC3Q14149 939 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 SF3A2Q15428 464 aaKnown RBP17.3■□□□□ 0.36
LINC00628-201ENST00000628516 ELF2Q15723 593 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 PREPLQ4J6C6 727 aaPredicted RBP17.3■□□□□ 0.36
LINC00628-201ENST00000628516 AASDHQ4L235 1098 aaPredicted RBP17.3■□□□□ 0.36
LINC00628-201ENST00000628516 CBWD6Q4V339 395 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 USP39Q53GS9 565 aaKnown RBP17.3■□□□□ 0.36
LINC00628-201ENST00000628516 CBWD3Q5JTY5 395 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 CBWD5Q5RIA9 395 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 TMEM92Q6UXU6 159 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 HTR3DQ70Z44 454 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 TMEM25Q86YD3 366 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 ETFBKMTQ8IXQ9 262 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 C12orf50Q8NA57 414 aaPredicted RBP17.3■□□□□ 0.36
LINC00628-201ENST00000628516 IL17RCQ8NAC3 791 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 SLC4A11Q8NBS3 891 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 TMEM176AQ96HP8 235 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 ARID3AQ99856 593 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 GTPBP4Q9BZE4 634 aaKnown RBP17.3■□□□□ 0.36
LINC00628-201ENST00000628516 DUSP15Q9H1R2 295 aaPredicted RBP17.3■□□□□ 0.36
LINC00628-201ENST00000628516 ZDHHC4Q9NPG8 344 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.3■□□□□ 0.36
LINC00628-201ENST00000628516 DEC1Q9P2X7 70 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 DNMT3LQ9UJW3 386 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 NAGPAQ9UK23 515 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 PCDHGA5Q9Y5G8 931 aa17.3■□□□□ 0.36
LINC00628-201ENST00000628516 SLC30A4O14863 429 aa17.29■□□□□ 0.36
LINC00628-201ENST00000628516 GREM1O60565 184 aa17.29■□□□□ 0.36
LINC00628-201ENST00000628516 TULP3O75386 442 aa17.29■□□□□ 0.36
LINC00628-201ENST00000628516 ALDH1A2O94788 518 aa17.29■□□□□ 0.36
LINC00628-201ENST00000628516 RHOBTB1O94844 696 aa17.29■□□□□ 0.36
LINC00628-201ENST00000628516 ZNF806P0C7X5 589 aa17.29■□□□□ 0.36
LINC00628-201ENST00000628516 PSEN1P49768 467 aa17.29■□□□□ 0.36
LINC00628-201ENST00000628516 RAD23BP54727 409 aa17.29■□□□□ 0.36
LINC00628-201ENST00000628516 LRRC63Q05C16 580 aa17.29■□□□□ 0.36
LINC00628-201ENST00000628516 HSF5Q4G112 596 aaPredicted RBP17.29■□□□□ 0.36
LINC00628-201ENST00000628516 C10orf120Q5SQS8 335 aa17.29■□□□□ 0.36
LINC00628-201ENST00000628516 KLHDC10Q6PID8 442 aa17.29■□□□□ 0.36
LINC00628-201ENST00000628516 CCDC186Q7Z3E2 898 aa17.29■□□□□ 0.36
LINC00628-201ENST00000628516 TADA2BQ86TJ2 420 aa17.29■□□□□ 0.36
LINC00628-201ENST00000628516 RASSF3Q86WH2 238 aa17.29■□□□□ 0.36
LINC00628-201ENST00000628516 ZC3H3Q8IXZ2 948 aaKnown RBP17.29■□□□□ 0.36
LINC00628-201ENST00000628516 PHTF2Q8N3S3 785 aa17.29■□□□□ 0.36
LINC00628-201ENST00000628516 CNOT6LQ96LI5 555 aaKnown RBP17.29■□□□□ 0.36
LINC00628-201ENST00000628516 USP3Q9Y6I4 520 aa17.29■□□□□ 0.36
LINC00628-201ENST00000628516 SGK1O00141 431 aa17.28■□□□□ 0.36
LINC00628-201ENST00000628516 RALAP11233 206 aa17.28■□□□□ 0.36
LINC00628-201ENST00000628516 HNRNPLP14866 589 aaKnown RBP eCLIP17.28■□□□□ 0.36
LINC00628-201ENST00000628516 MPLP40238 635 aa17.28■□□□□ 0.36
LINC00628-201ENST00000628516 KIR2DL1P43626 348 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms