RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 STRADAQ7RTN6 431 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 BNIPLQ7Z465 357 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 ECHDC2Q86YB7 292 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 GLT1D1Q96MS3 346 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 RTP3Q9BQQ7 232 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 MAK16Q9BXY0 300 aaKnown RBP20.49■□□□□ 0.87
TREX1-205ENST00000625293 C10orf88Q9H8K7 445 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 CDH9Q9ULB4 789 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 PHF24Q9UPV7 400 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 FARP1Q9Y4F1 1045 aaPredicted RBP20.49■□□□□ 0.87
TREX1-205ENST00000625293 TIMM13Q9Y5L4 95 aaPredicted RBP20.49■□□□□ 0.87
TREX1-205ENST00000625293 ALPK3Q96L96 1907 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 A0A1W2PQ45 241 aaPredicted RBP20.49■□□□□ 0.87
TREX1-205ENST00000625293 A0A1W2PQY0 241 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 MYBPHLA2RUH7 354 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 NDC80O14777 642 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 MCF2LO15068 1137 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 CYP11A1P05108 521 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 FAM200BP0CF97 657 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 CKBP12277 381 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 ATXN1P54253 815 aaKnown RBP20.49■□□□□ 0.87
TREX1-205ENST00000625293 ANKRD20A8PQ5CZ79 823 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 ERMARDQ5T6L9 678 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 OTUD1Q5VV17 481 aaPredicted RBP20.49■□□□□ 0.87
TREX1-205ENST00000625293 NPNTQ6UXI9 565 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 LRRC31Q6UY01 552 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 SLC39A5Q6ZMH5 540 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 CEP128Q6ZU80 1094 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 FAM35AQ86V20 835 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 UNC45BQ8IWX7 931 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 ARFGAP2Q8N6H7 521 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 PLD5Q8N7P1 536 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 PCDH19Q8TAB3 1148 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 NT5C3BQ969T7 300 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 ROPN1BQ9BZX4 212 aaPredicted RBP20.49■□□□□ 0.87
TREX1-205ENST00000625293 ROPN1Q9HAT0 212 aaPredicted RBP20.49■□□□□ 0.87
TREX1-205ENST00000625293 KRT82Q9NSB4 513 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 DNAJC17Q9NVM6 304 aaKnown RBP20.49■□□□□ 0.87
TREX1-205ENST00000625293 CALCOCO1Q9P1Z2 691 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 SLC12A6Q9UHW9 1150 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 SHOC2Q9UQ13 582 aa20.49■□□□□ 0.87
TREX1-205ENST00000625293 ERICH4A6NGS2 130 aa20.48■□□□□ 0.87
TREX1-205ENST00000625293 POMCP01189 267 aa20.48■□□□□ 0.87
TREX1-205ENST00000625293 IFNB1P01574 187 aa20.48■□□□□ 0.87
TREX1-205ENST00000625293 RBP3P10745 1247 aa20.48■□□□□ 0.87
TREX1-205ENST00000625293 TGM2P21980 687 aa20.48■□□□□ 0.87
TREX1-205ENST00000625293 KYNUQ16719 465 aa20.48■□□□□ 0.87
TREX1-205ENST00000625293 C6orf118Q5T5N4 469 aa20.48■□□□□ 0.87
TREX1-205ENST00000625293 MFSD5Q6N075 450 aa20.48■□□□□ 0.87
TREX1-205ENST00000625293 DEFB106AQ8N104 65 aa20.48■□□□□ 0.87
TREX1-205ENST00000625293 RNF169Q8NCN4 708 aa20.48■□□□□ 0.87
TREX1-205ENST00000625293 ZMIZ2Q8NF64 920 aa20.48■□□□□ 0.87
TREX1-205ENST00000625293 UHMK1Q8TAS1 419 aaKnown RBP20.48■□□□□ 0.87
TREX1-205ENST00000625293 PRCCQ92733 491 aaPredicted RBP20.48■□□□□ 0.87
TREX1-205ENST00000625293 PCED1BQ96HM7 432 aa20.48■□□□□ 0.87
TREX1-205ENST00000625293 SMOQ99835 787 aa20.48■□□□□ 0.87
TREX1-205ENST00000625293 MED10Q9BTT4 135 aa20.48■□□□□ 0.87
TREX1-205ENST00000625293 MTMR10Q9NXD2 777 aa20.48■□□□□ 0.87
TREX1-205ENST00000625293 BCCIPQ9P287 314 aaKnown RBP eCLIP20.48■□□□□ 0.87
TREX1-205ENST00000625293 EIF3HO15372 352 aaKnown RBP eCLIP20.47■□□□□ 0.87
TREX1-205ENST00000625293 ACSL3O95573 720 aa20.47■□□□□ 0.87
TREX1-205ENST00000625293 PAX3P23760 479 aa20.47■□□□□ 0.87
TREX1-205ENST00000625293 L1CAMP32004 1257 aa20.47■□□□□ 0.87
TREX1-205ENST00000625293 RPL22P35268 128 aaKnown RBP20.47■□□□□ 0.87
TREX1-205ENST00000625293 MAGOHP61326 146 aaKnown RBP20.47■□□□□ 0.87
TREX1-205ENST00000625293 GNGT1P63211 74 aa20.47■□□□□ 0.87
TREX1-205ENST00000625293 TUSC3Q13454 348 aa20.47■□□□□ 0.87
TREX1-205ENST00000625293 MBTPS1Q14703 1052 aa20.47■□□□□ 0.87
TREX1-205ENST00000625293 SLC25A52Q3SY17 297 aa20.47■□□□□ 0.87
TREX1-205ENST00000625293 MYCBPAPQ8TBZ2 947 aa20.47■□□□□ 0.87
TREX1-205ENST00000625293 EPS8L3Q8TE67 593 aaKnown RBP20.47■□□□□ 0.87
TREX1-205ENST00000625293 NDRG1Q92597 394 aaKnown RBP20.47■□□□□ 0.87
TREX1-205ENST00000625293 SLC2A13Q96QE2 648 aa20.47■□□□□ 0.87
TREX1-205ENST00000625293 RBM15Q96T37 977 aaKnown RBP eCLIP20.47■□□□□ 0.87
TREX1-205ENST00000625293 HTATIP2Q9BUP3 242 aa20.47■□□□□ 0.87
TREX1-205ENST00000625293 TRPV6Q9H1D0 765 aa20.47■□□□□ 0.87
TREX1-205ENST00000625293 RGS18Q9NS28 235 aa20.47■□□□□ 0.87
TREX1-205ENST00000625293 TMEM30AQ9NV96 361 aa20.47■□□□□ 0.87
TREX1-205ENST00000625293 TSC2P49815 1807 aa20.46■□□□□ 0.87
TREX1-205ENST00000625293 M0QZQ0 153 aa20.46■□□□□ 0.87
TREX1-205ENST00000625293 TCEA3O75764 348 aa20.46■□□□□ 0.87
TREX1-205ENST00000625293 ODC1P11926 461 aa20.46■□□□□ 0.87
TREX1-205ENST00000625293 NDUFV1P49821 464 aa20.46■□□□□ 0.87
TREX1-205ENST00000625293 MAP3K7CLP57077 242 aa20.46■□□□□ 0.87
TREX1-205ENST00000625293 RAB41Q5JT25 222 aa20.46■□□□□ 0.87
TREX1-205ENST00000625293 RTN4RL1Q86UN2 441 aaPredicted RBP20.46■□□□□ 0.87
TREX1-205ENST00000625293 C7orf61Q8IZ16 206 aa20.46■□□□□ 0.87
TREX1-205ENST00000625293 RSAD2Q8WXG1 361 aa20.46■□□□□ 0.87
TREX1-205ENST00000625293 P3H4Q92791 437 aa20.46■□□□□ 0.87
TREX1-205ENST00000625293 UROC1Q96N76 676 aa20.46■□□□□ 0.87
TREX1-205ENST00000625293 LRRC4Q9HBW1 653 aa20.46■□□□□ 0.87
TREX1-205ENST00000625293 CEP290O15078 2479 aa20.46■□□□□ 0.87
TREX1-205ENST00000625293 RANBP2P49792 3224 aaKnown RBP20.46■□□□□ 0.87
TREX1-205ENST00000625293 APOL1O14791 398 aa20.46■□□□□ 0.87
TREX1-205ENST00000625293 PCSK1P29120 753 aa20.46■□□□□ 0.87
TREX1-205ENST00000625293 HPDP32754 393 aaPredicted RBP20.46■□□□□ 0.87
TREX1-205ENST00000625293 CACNA2D1P54289 1103 aa20.46■□□□□ 0.87
TREX1-205ENST00000625293 YWHAZP63104 245 aaKnown RBP20.46■□□□□ 0.87
TREX1-205ENST00000625293 PPP2R2AP63151 447 aa20.46■□□□□ 0.87
TREX1-205ENST00000625293 ROR1Q01973 937 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms