RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 ZBP1Q9H171 429 aa12.3□□□□□ -0.44
LINC00963-220ENST00000625171 HOMER3Q9NSC5 361 aa12.3□□□□□ -0.44
LINC00963-220ENST00000625171 ABCC13Q9NSE7 274 aa12.3□□□□□ -0.44
LINC00963-220ENST00000625171 USP18Q9UMW8 372 aa12.3□□□□□ -0.44
LINC00963-220ENST00000625171 WDR27A2RRH5 827 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 YJEFN3A6XGL0 299 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 E7ENQ6 273 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 FGF18O76093 207 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 URODP06132 367 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 OR4Q2P0C623 313 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 CPB1P15086 417 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 OR1D2P34982 312 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 PLA2G5P39877 138 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 MARCKSL1P49006 195 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 ARSEP51690 589 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 ZNF135P52742 658 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-220ENST00000625171 SLC5A3P53794 718 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 HDAC4P56524 1084 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 KLF1Q13351 362 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-220ENST00000625171 SNX30Q5VWJ9 437 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 RNF19BQ6ZMZ0 732 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 CYP4V2Q6ZWL3 525 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-220ENST00000625171 GPRIN1Q7Z2K8 1008 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 SLC13A5Q86YT5 568 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-220ENST00000625171 TCEAL8Q8IYN2 117 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 DEFB106AQ8N104 65 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 VPS52Q8N1B4 723 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 CLEC4CQ8WTT0 213 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 MS4A14Q96JA4 679 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 MYRFLQ96LU7 910 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 RUNDC3BQ96NL0 473 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 ASB2Q96Q27 587 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 MRPL17Q9NRX2 175 aaKnown RBP12.29□□□□□ -0.44
LINC00963-220ENST00000625171 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.29□□□□□ -0.44
LINC00963-220ENST00000625171 ABI2Q9NYB9 513 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-220ENST00000625171 CLIC5Q9NZA1 410 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 THEGQ9P2T0 379 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 CDY1Q9Y6F8 540 aa12.29□□□□□ -0.44
LINC00963-220ENST00000625171 TARSL2A2RTX5 802 aaKnown RBP12.28□□□□□ -0.44
LINC00963-220ENST00000625171 C3orf70A6NLC5 250 aaPredicted RBP12.28□□□□□ -0.44
LINC00963-220ENST00000625171 TLL1O43897 1013 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 PRPSAP2O60256 369 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 IGLV3-25P01717 112 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 FGGP02679 453 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 USP17L7P0C7H9 530 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 ZDHHC11BP0C7U3 371 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 KDELR1P24390 212 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 IL1R2P27930 398 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 PPP3CCP48454 512 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 RNASE9P60153 205 aaKnown RBP12.28□□□□□ -0.44
LINC00963-220ENST00000625171 NNTQ13423 1086 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 BSPRYQ5W0U4 402 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 PDE12Q6L8Q7 609 aaKnown RBP12.28□□□□□ -0.44
LINC00963-220ENST00000625171 FAM117BQ6P1L5 589 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 DRICH1Q6PGQ1 229 aaPredicted RBP12.28□□□□□ -0.44
LINC00963-220ENST00000625171 PRSS55Q6UWB4 352 aaPredicted RBP12.28□□□□□ -0.44
LINC00963-220ENST00000625171 DENND5BQ6ZUT9 1274 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 TMCO2Q7Z6W1 182 aaPredicted RBP12.28□□□□□ -0.44
LINC00963-220ENST00000625171 CPNE8Q86YQ8 564 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 MAP7D3Q8IWC1 876 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 C12orf50Q8NA57 414 aaPredicted RBP12.28□□□□□ -0.44
LINC00963-220ENST00000625171 ATAD1Q8NBU5 361 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 NTAN1Q96AB6 310 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 CAPZA3Q96KX2 299 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 B3GALT6Q96L58 329 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 CFAP57Q96MR6 1250 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 PSMB7Q99436 277 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 FRMD8P1Q9BZ68 369 aaPredicted RBP12.28□□□□□ -0.44
LINC00963-220ENST00000625171 SLITRK6Q9H5Y7 841 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 LRRC19Q9H756 370 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 RCOR3Q9P2K3 495 aaPredicted RBP12.28□□□□□ -0.44
LINC00963-220ENST00000625171 MTUS1Q9ULD2 1270 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 PTPRSQ13332 1948 aa12.28□□□□□ -0.44
LINC00963-220ENST00000625171 FAM170AA1A519 330 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 PIK3R2O00459 728 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 DYNC1I1O14576 645 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 RARAP10276 462 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 CDKN2BP42772 138 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 SCAPQ12770 1279 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 MTA1Q13330 715 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 SIX1Q15475 284 aaPredicted RBP12.27□□□□□ -0.45
LINC00963-220ENST00000625171 DPYSL2Q16555 572 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 LONRF2Q1L5Z9 754 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 DCAF6Q58WW2 860 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 TFDP3Q5H9I0 405 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 ERMARDQ5T6L9 678 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 ACBD5Q5T8D3 534 aaPredicted RBP12.27□□□□□ -0.45
LINC00963-220ENST00000625171 MSANTD2Q6P1R3 559 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 LILRA6Q6PI73 481 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 EIF1ADQ8N9N8 165 aaKnown RBP12.27□□□□□ -0.45
LINC00963-220ENST00000625171 KLHL23Q8NBE8 558 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 ADAMTS19Q8TE59 1207 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 FAM172AQ8WUF8 416 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 SLCO2A1Q92959 643 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 FAM149B1Q96BN6 582 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 FAF2Q96CS3 445 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 TRMT2BQ96GJ1 504 aaKnown RBP12.27□□□□□ -0.45
LINC00963-220ENST00000625171 SLITRK1Q96PX8 696 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 RHOBTB2Q9BYZ6 727 aa12.27□□□□□ -0.45
LINC00963-220ENST00000625171 OSBPL8Q9BZF1 889 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms