RNA–Protein interactions for RNA: ENST00000624668.3

ATRX-217, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-217ENST00000624668 NIF3L1Q9GZT8 377 aa16.41■□□□□ 0.22
ATRX-217ENST00000624668 FBXO44Q9H4M3 255 aa16.41■□□□□ 0.22
ATRX-217ENST00000624668 MMRN2Q9H8L6 949 aa16.41■□□□□ 0.22
ATRX-217ENST00000624668 CYLDQ9NQC7 956 aa16.41■□□□□ 0.22
ATRX-217ENST00000624668 SPHK2Q9NRA0 654 aa16.41■□□□□ 0.22
ATRX-217ENST00000624668 VPS45Q9NRW7 570 aa16.41■□□□□ 0.22
ATRX-217ENST00000624668 CEP295Q9C0D2 2601 aa16.4■□□□□ 0.22
ATRX-217ENST00000624668 ZFHX4Q86UP3 3567 aa16.4■□□□□ 0.22
ATRX-217ENST00000624668 A0A1W2PQH9 124 aa16.4■□□□□ 0.22
ATRX-217ENST00000624668 MDM4O15151 490 aa16.4■□□□□ 0.22
ATRX-217ENST00000624668 RHOBTB1O94844 696 aa16.4■□□□□ 0.22
ATRX-217ENST00000624668 ZNF202O95125 648 aa16.4■□□□□ 0.22
ATRX-217ENST00000624668 KIF20AO95235 890 aa16.4■□□□□ 0.22
ATRX-217ENST00000624668 ACO1P21399 889 aaKnown RBP16.4■□□□□ 0.22
ATRX-217ENST00000624668 PSMC2P35998 433 aaKnown RBP16.4■□□□□ 0.22
ATRX-217ENST00000624668 TNFRSF4P43489 277 aa16.4■□□□□ 0.22
ATRX-217ENST00000624668 ADAM9Q13443 819 aa16.4■□□□□ 0.22
ATRX-217ENST00000624668 USP39Q53GS9 565 aaKnown RBP16.4■□□□□ 0.22
ATRX-217ENST00000624668 HTR3DQ70Z44 454 aa16.4■□□□□ 0.22
ATRX-217ENST00000624668 MIB1Q86YT6 1006 aa16.4■□□□□ 0.22
ATRX-217ENST00000624668 RLN3Q8WXF3 142 aa16.4■□□□□ 0.22
ATRX-217ENST00000624668 NT5C1AQ9BXI3 368 aa16.4■□□□□ 0.22
ATRX-217ENST00000624668 NACA2Q9H009 215 aa16.4■□□□□ 0.22
ATRX-217ENST00000624668 CYP3A43Q9HB55 503 aa16.4■□□□□ 0.22
ATRX-217ENST00000624668 TMEM8AQ9HCN3 771 aa16.4■□□□□ 0.22
ATRX-217ENST00000624668 NUDT5Q9UKK9 219 aa16.4■□□□□ 0.22
ATRX-217ENST00000624668 SCML2Q9UQR0 700 aa16.4■□□□□ 0.22
ATRX-217ENST00000624668 MYH10P35580 1976 aa16.39■□□□□ 0.21
ATRX-217ENST00000624668 CAVIN2O95810 425 aa16.39■□□□□ 0.21
ATRX-217ENST00000624668 ANO4Q32M45 955 aa16.39■□□□□ 0.21
ATRX-217ENST00000624668 PPP1R26Q5T8A7 1209 aaPredicted RBP16.39■□□□□ 0.21
ATRX-217ENST00000624668 SCD5Q86SK9 330 aa16.39■□□□□ 0.21
ATRX-217ENST00000624668 TTC30AQ86WT1 665 aa16.39■□□□□ 0.21
ATRX-217ENST00000624668 CCDC47Q96A33 483 aaKnown RBP16.39■□□□□ 0.21
ATRX-217ENST00000624668 ARID3AQ99856 593 aa16.39■□□□□ 0.21
ATRX-217ENST00000624668 SCAND2PQ9GZW5 306 aaPredicted RBP16.39■□□□□ 0.21
ATRX-217ENST00000624668 TLR8Q9NR97 1041 aaKnown RBP16.39■□□□□ 0.21
ATRX-217ENST00000624668 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.39■□□□□ 0.21
ATRX-217ENST00000624668 TBC1D3BA6NDS4 549 aa16.38■□□□□ 0.21
ATRX-217ENST00000624668 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.38■□□□□ 0.21
ATRX-217ENST00000624668 PATE3B3GLJ2 98 aa16.38■□□□□ 0.21
ATRX-217ENST00000624668 KRT13P13646 458 aa16.38■□□□□ 0.21
ATRX-217ENST00000624668 ATP5C1P36542 298 aaKnown RBP16.38■□□□□ 0.21
ATRX-217ENST00000624668 P2RY2P41231 377 aa16.38■□□□□ 0.21
ATRX-217ENST00000624668 KIF11P52732 1056 aa16.38■□□□□ 0.21
ATRX-217ENST00000624668 ENPEPQ07075 957 aa16.38■□□□□ 0.21
ATRX-217ENST00000624668 PNOCQ13519 176 aa16.38■□□□□ 0.21
ATRX-217ENST00000624668 HSF5Q4G112 596 aaPredicted RBP16.38■□□□□ 0.21
ATRX-217ENST00000624668 ZNF394Q53GI3 561 aa16.38■□□□□ 0.21
ATRX-217ENST00000624668 IL31Q6EBC2 164 aa16.38■□□□□ 0.21
ATRX-217ENST00000624668 TERB1Q8NA31 727 aa16.38■□□□□ 0.21
ATRX-217ENST00000624668 HMGB4Q8WW32 186 aa16.38■□□□□ 0.21
ATRX-217ENST00000624668 IMPG2Q9BZV3 1241 aa16.38■□□□□ 0.21
ATRX-217ENST00000624668 PNPLA8Q9NP80 782 aa16.38■□□□□ 0.21
ATRX-217ENST00000624668 DEC1Q9P2X7 70 aa16.38■□□□□ 0.21
ATRX-217ENST00000624668 MBD1Q9UIS9 605 aaPredicted RBP16.38■□□□□ 0.21
ATRX-217ENST00000624668 PCDHA5Q9Y5H7 936 aa16.38■□□□□ 0.21
ATRX-217ENST00000624668 THADAQ6YHU6 1953 aa16.37■□□□□ 0.21
ATRX-217ENST00000624668 MAP1BP46821 2468 aaKnown RBP16.37■□□□□ 0.21
ATRX-217ENST00000624668 NUP205Q92621 2012 aa16.37■□□□□ 0.21
ATRX-217ENST00000624668 LNP1A1A4G5 178 aa16.37■□□□□ 0.21
ATRX-217ENST00000624668 RARGP13631 454 aa16.37■□□□□ 0.21
ATRX-217ENST00000624668 KCNA4P22459 653 aa16.37■□□□□ 0.21
ATRX-217ENST00000624668 RPL13P26373 211 aaKnown RBP16.37■□□□□ 0.21
ATRX-217ENST00000624668 EDRF1Q3B7T1 1238 aa16.37■□□□□ 0.21
ATRX-217ENST00000624668 MAP7D1Q3KQU3 841 aa16.37■□□□□ 0.21
ATRX-217ENST00000624668 C10orf76Q5T2E6 689 aa16.37■□□□□ 0.21
ATRX-217ENST00000624668 BTBD8Q5XKL5 378 aa16.37■□□□□ 0.21
ATRX-217ENST00000624668 KRT39Q6A163 491 aa16.37■□□□□ 0.21
ATRX-217ENST00000624668 Q6ZNB5 142 aa16.37■□□□□ 0.21
ATRX-217ENST00000624668 ZNF513Q8N8E2 541 aaPredicted RBP16.37■□□□□ 0.21
ATRX-217ENST00000624668 ACOX2Q99424 681 aa16.37■□□□□ 0.21
ATRX-217ENST00000624668 EDEM2Q9BV94 578 aa16.37■□□□□ 0.21
ATRX-217ENST00000624668 DUSP16Q9BY84 665 aa16.37■□□□□ 0.21
ATRX-217ENST00000624668 CD248Q9HCU0 757 aa16.37■□□□□ 0.21
ATRX-217ENST00000624668 USP3Q9Y6I4 520 aa16.37■□□□□ 0.21
ATRX-217ENST00000624668 USP24Q9UPU5 2620 aa16.37■□□□□ 0.21
ATRX-217ENST00000624668 ASPMQ8IZT6 3477 aa16.37■□□□□ 0.21
ATRX-217ENST00000624668 MYO18AQ92614 2054 aaKnown RBP16.36■□□□□ 0.21
ATRX-217ENST00000624668 TNRC6BQ9UPQ9 1833 aaKnown RBP16.36■□□□□ 0.21
ATRX-217ENST00000624668 TCRBV21S2A2A0A5A6 115 aa16.36■□□□□ 0.21
ATRX-217ENST00000624668 PRRT4C9JH25 899 aa16.36■□□□□ 0.21
ATRX-217ENST00000624668 NEDD8-MDP1E9PL57 170 aa16.36■□□□□ 0.21
ATRX-217ENST00000624668 CACNG3O60359 315 aa16.36■□□□□ 0.21
ATRX-217ENST00000624668 KLKB1P03952 638 aa16.36■□□□□ 0.21
ATRX-217ENST00000624668 GTF2H1P32780 548 aa16.36■□□□□ 0.21
ATRX-217ENST00000624668 WASP42768 502 aa16.36■□□□□ 0.21
ATRX-217ENST00000624668 PTGER3P43115 390 aa16.36■□□□□ 0.21
ATRX-217ENST00000624668 PMS1P54277 932 aaKnown RBP16.36■□□□□ 0.21
ATRX-217ENST00000624668 RAD23BP54727 409 aa16.36■□□□□ 0.21
ATRX-217ENST00000624668 CBWD6Q4V339 395 aa16.36■□□□□ 0.21
ATRX-217ENST00000624668 CBWD3Q5JTY5 395 aa16.36■□□□□ 0.21
ATRX-217ENST00000624668 EOGTQ5NDL2 527 aa16.36■□□□□ 0.21
ATRX-217ENST00000624668 CBWD5Q5RIA9 395 aa16.36■□□□□ 0.21
ATRX-217ENST00000624668 N4BP2L1Q5TBK1 243 aaPredicted RBP16.36■□□□□ 0.21
ATRX-217ENST00000624668 EGFLAMQ63HQ2 1017 aa16.36■□□□□ 0.21
ATRX-217ENST00000624668 RNF43Q68DV7 783 aa16.36■□□□□ 0.21
ATRX-217ENST00000624668 KLHDC10Q6PID8 442 aa16.36■□□□□ 0.21
ATRX-217ENST00000624668 TPGS1Q6ZTW0 290 aa16.36■□□□□ 0.21
ATRX-217ENST00000624668 TOGARAM2Q6ZUX3 1019 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms