RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 GMIPQ9P107 970 aa20.8■□□□□ 0.92
PDLIM2-221ENST00000622702 YJEFN3A6XGL0 299 aa20.79■□□□□ 0.92
PDLIM2-221ENST00000622702 C2CD4DB7Z1M9 353 aa20.79■□□□□ 0.92
PDLIM2-221ENST00000622702 E7ENQ6 273 aa20.79■□□□□ 0.92
PDLIM2-221ENST00000622702 FSHRP23945 695 aa20.79■□□□□ 0.92
PDLIM2-221ENST00000622702 PSEN1P49768 467 aa20.79■□□□□ 0.92
PDLIM2-221ENST00000622702 HS1BP3Q53T59 392 aa20.79■□□□□ 0.92
PDLIM2-221ENST00000622702 FAM102AQ5T9C2 384 aaPredicted RBP20.79■□□□□ 0.92
PDLIM2-221ENST00000622702 SNX30Q5VWJ9 437 aa20.79■□□□□ 0.92
PDLIM2-221ENST00000622702 DNAJC24Q6P3W2 148 aa20.79■□□□□ 0.92
PDLIM2-221ENST00000622702 ARCQ7LC44 396 aa20.79■□□□□ 0.92
PDLIM2-221ENST00000622702 SCD5Q86SK9 330 aa20.79■□□□□ 0.92
PDLIM2-221ENST00000622702 TXLNBQ8N3L3 684 aa20.79■□□□□ 0.92
PDLIM2-221ENST00000622702 KHSRPQ92945 711 aaKnown RBP eCLIP20.79■□□□□ 0.92
PDLIM2-221ENST00000622702 USTQ9Y2C2 406 aa20.79■□□□□ 0.92
PDLIM2-221ENST00000622702 SCINQ9Y6U3 715 aa20.79■□□□□ 0.92
PDLIM2-221ENST00000622702 NOTCH4Q99466 2003 aa20.79■□□□□ 0.92
PDLIM2-221ENST00000622702 SIGLEC16A6NMB1 481 aa20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 GOLGA8SH3BPF8 625 aa20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 ATMINO43313 823 aaPredicted RBP20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 HSF2BPO75031 334 aa20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 FGF19O95750 216 aa20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 F11P03951 625 aa20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 RHOP08100 348 aa20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 CCDC175P0C221 793 aa20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 MAMLD1Q13495 774 aa20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 PPP1R15BQ5SWA1 713 aa20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 BEND5Q7L4P6 421 aa20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 GET4Q7L5D6 327 aaPredicted RBP20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 OTOP3Q7RTS5 596 aa20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 PHLDB2Q86SQ0 1253 aa20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 TMEM150AQ86TG1 271 aa20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 HS6ST3Q8IZP7 471 aa20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 TDRD5Q8NAT2 981 aaKnown RBP20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 ACSF2Q96CM8 615 aaPredicted RBP20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 ARHGEF26Q96DR7 871 aa20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 TRIM62Q9BVG3 475 aa20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 NMUR1Q9HB89 426 aa20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 MRPL47Q9HD33 250 aaKnown RBP20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 TLR8Q9NR97 1041 aaKnown RBP20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 CLIC5Q9NZA1 410 aa20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 CHORDC1Q9UHD1 332 aaPredicted RBP20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 TMEM59LQ9UK28 342 aa20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.78■□□□□ 0.92
PDLIM2-221ENST00000622702 NCOR1O75376 2440 aa20.77■□□□□ 0.92
PDLIM2-221ENST00000622702 MYO16Q9Y6X6 1858 aa20.77■□□□□ 0.92
PDLIM2-221ENST00000622702 ZNF840PA6NDX5 716 aa20.77■□□□□ 0.92
PDLIM2-221ENST00000622702 PJA2O43164 708 aa20.77■□□□□ 0.92
PDLIM2-221ENST00000622702 TADA3O75528 432 aa20.77■□□□□ 0.92
PDLIM2-221ENST00000622702 LTFP02788 710 aa20.77■□□□□ 0.92
PDLIM2-221ENST00000622702 CDC25CP30307 473 aa20.77■□□□□ 0.92
PDLIM2-221ENST00000622702 GBP2P32456 591 aaPredicted RBP20.77■□□□□ 0.92
PDLIM2-221ENST00000622702 YWHAGP61981 247 aaKnown RBP eCLIP20.77■□□□□ 0.92
PDLIM2-221ENST00000622702 YWHAZP63104 245 aaKnown RBP20.77■□□□□ 0.92
PDLIM2-221ENST00000622702 TCEAL1Q15170 157 aa20.77■□□□□ 0.92
PDLIM2-221ENST00000622702 TAF5Q15542 800 aa20.77■□□□□ 0.92
PDLIM2-221ENST00000622702 BSPRYQ5W0U4 402 aa20.77■□□□□ 0.92
PDLIM2-221ENST00000622702 HFE2Q6ZVN8 426 aa20.77■□□□□ 0.92
PDLIM2-221ENST00000622702 GAREM2Q75VX8 874 aa20.77■□□□□ 0.92
PDLIM2-221ENST00000622702 KIAA1328Q86T90 577 aa20.77■□□□□ 0.92
PDLIM2-221ENST00000622702 GOLGA1Q92805 767 aa20.77■□□□□ 0.92
PDLIM2-221ENST00000622702 SELENOOQ9BVL4 669 aa20.77■□□□□ 0.92
PDLIM2-221ENST00000622702 METTL5Q9NRN9 209 aaKnown RBP20.77■□□□□ 0.92
PDLIM2-221ENST00000622702 TRPM5Q9NZQ8 1165 aa20.77■□□□□ 0.92
PDLIM2-221ENST00000622702 A0A1W2PQH9 124 aa20.76■□□□□ 0.91
PDLIM2-221ENST00000622702 RCCD1A6NED2 376 aa20.76■□□□□ 0.91
PDLIM2-221ENST00000622702 KRT3P12035 628 aa20.76■□□□□ 0.91
PDLIM2-221ENST00000622702 GABRR2P28476 465 aa20.76■□□□□ 0.91
PDLIM2-221ENST00000622702 PGFP49763 221 aa20.76■□□□□ 0.91
PDLIM2-221ENST00000622702 PDZD4Q76G19 769 aaPredicted RBP20.76■□□□□ 0.91
PDLIM2-221ENST00000622702 ZNF276Q8N554 614 aa20.76■□□□□ 0.91
PDLIM2-221ENST00000622702 ITFG1Q8TB96 612 aa20.76■□□□□ 0.91
PDLIM2-221ENST00000622702 RFFLQ8WZ73 363 aa20.76■□□□□ 0.91
PDLIM2-221ENST00000622702 FAM149B1Q96BN6 582 aa20.76■□□□□ 0.91
PDLIM2-221ENST00000622702 SLC2A13Q96QE2 648 aa20.76■□□□□ 0.91
PDLIM2-221ENST00000622702 MYADMQ96S97 322 aa20.76■□□□□ 0.91
PDLIM2-221ENST00000622702 POPDC2Q9HBU9 364 aa20.76■□□□□ 0.91
PDLIM2-221ENST00000622702 ABCC13Q9NSE7 274 aa20.76■□□□□ 0.91
PDLIM2-221ENST00000622702 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.76■□□□□ 0.91
PDLIM2-221ENST00000622702 UVRAGQ9P2Y5 699 aa20.76■□□□□ 0.91
PDLIM2-221ENST00000622702 MYO1AQ9UBC5 1043 aa20.76■□□□□ 0.91
PDLIM2-221ENST00000622702 MRPS23Q9Y3D9 190 aaKnown RBP20.76■□□□□ 0.91
PDLIM2-221ENST00000622702 A0A0A6YYK5 440 aaPredicted RBP20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 BTNL10A8MVZ5 291 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 DAB1O75553 588 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 FYNP06241 537 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 MYL4P12829 197 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 SLC5A9Q2M3M2 681 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 PRSS36Q5K4E3 855 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 ZNF662Q6ZS27 426 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 RHOT2Q8IXI1 618 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 PLCD3Q8N3E9 789 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 GCNAQ96QF7 691 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 LACRTQ9GZZ8 138 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 OSER1Q9NX31 292 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 PPP2R2CQ9Y2T4 447 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 ZNF197O14709 1029 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 GRAP2O75791 330 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 CCR2P41597 374 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 TUBP50607 506 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms