RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 LGALS13Q9UHV8 139 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 DNPEPQ9ULA0 475 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 CHKBQ9Y259 395 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 COQ6Q9Y2Z9 468 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 SNX9Q9Y5X1 595 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 WASF2Q9Y6W5 498 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 A0A088AWK7 358 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 LRRIQ4A6NIV6 560 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 NOTOA8MTQ0 251 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 FOXN2P32314 431 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 STAT4Q14765 748 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 EMC2Q15006 297 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 TRIM72Q6ZMU5 477 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 ACAD11Q709F0 780 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 PHF13Q86YI8 300 aaPredicted RBP12.93□□□□□ -0.34
LITAF-221ENST00000622633 ALDH16A1Q8IZ83 802 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 FEZF2Q8TBJ5 459 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 NSUN6Q8TEA1 469 aaKnown RBP12.93□□□□□ -0.34
LITAF-221ENST00000622633 COX4I2Q96KJ9 171 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 PRPF18Q99633 342 aaKnown RBP12.93□□□□□ -0.34
LITAF-221ENST00000622633 MIPEPQ99797 713 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 SAYSD1Q9NPB0 183 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 KIAA1257Q9ULG3 409 aa12.93□□□□□ -0.34
LITAF-221ENST00000622633 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.93□□□□□ -0.34
LITAF-221ENST00000622633 SPAG7O75391 227 aa12.92□□□□□ -0.34
LITAF-221ENST00000622633 ATF7P17544 494 aaPredicted RBP12.92□□□□□ -0.34
LITAF-221ENST00000622633 PTPN2P17706 415 aa12.92□□□□□ -0.34
LITAF-221ENST00000622633 BCAP31P51572 246 aa12.92□□□□□ -0.34
LITAF-221ENST00000622633 COG7P83436 770 aa12.92□□□□□ -0.34
LITAF-221ENST00000622633 DSG1Q02413 1049 aa12.92□□□□□ -0.34
LITAF-221ENST00000622633 MFSD7Q6UXD7 560 aa12.92□□□□□ -0.34
LITAF-221ENST00000622633 FASTKD5Q7L8L6 764 aaKnown RBP12.92□□□□□ -0.34
LITAF-221ENST00000622633 ZCCHC9Q8N567 271 aaKnown RBP12.92□□□□□ -0.34
LITAF-221ENST00000622633 DDHD1Q8NEL9 900 aa12.92□□□□□ -0.34
LITAF-221ENST00000622633 ACSF2Q96CM8 615 aaPredicted RBP12.92□□□□□ -0.34
LITAF-221ENST00000622633 MSTO1Q9BUK6 570 aa12.92□□□□□ -0.34
LITAF-221ENST00000622633 SEZ6LQ9BYH1 1024 aa12.92□□□□□ -0.34
LITAF-221ENST00000622633 PDGFDQ9GZP0 370 aaPredicted RBP12.92□□□□□ -0.34
LITAF-221ENST00000622633 PARVAQ9NVD7 372 aa12.92□□□□□ -0.34
LITAF-221ENST00000622633 FAF1Q9UNN5 650 aaPredicted RBP12.92□□□□□ -0.34
LITAF-221ENST00000622633 SLC30A1Q9Y6M5 507 aa12.92□□□□□ -0.34
LITAF-221ENST00000622633 H0YCG3 227 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 K7ERI5 159 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 LIASO43766 372 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 STAM2O75886 525 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 PGM3O95394 542 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 PABPC1P11940 636 aaKnown RBP12.91□□□□□ -0.34
LITAF-221ENST00000622633 DPEP1P16444 411 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 TAC1P20366 129 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 GLRA2P23416 452 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 RCVRNP35243 200 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 EIF2B2P49770 351 aaKnown RBP12.91□□□□□ -0.34
LITAF-221ENST00000622633 NOP14P78316 857 aaKnown RBP12.91□□□□□ -0.34
LITAF-221ENST00000622633 SP2Q02086 613 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 WASHC5Q12768 1159 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 XKR3Q5GH77 459 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 ZNF449Q6P9G9 518 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 ARHGEF18Q6ZSZ5 1173 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 MAML1Q92585 1016 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 VCPIP1Q96JH7 1222 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 MAGEB18Q96M61 343 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 VTA1Q9NP79 307 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 FBXO40Q9UH90 709 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 STYXL1Q9Y6J8 313 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 SCINQ9Y6U3 715 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 POC1B-GALNT4F8VUJ3 575 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 CBX6O95503 412 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 KRT1P04264 644 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 EDN1P05305 212 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 RASSF2P50749 326 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 WDR4P57081 412 aaKnown RBP12.91□□□□□ -0.34
LITAF-221ENST00000622633 C1QBPQ07021 282 aaKnown RBP12.91□□□□□ -0.34
LITAF-221ENST00000622633 FASTKD3Q14CZ7 662 aaKnown RBP12.91□□□□□ -0.34
LITAF-221ENST00000622633 RELL1Q8IUW5 271 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 RCOR2Q8IZ40 523 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.91□□□□□ -0.34
LITAF-221ENST00000622633 ZNF280CQ8ND82 737 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 ZNF606Q8WXB4 792 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 MRRFQ96E11 262 aaKnown RBP12.91□□□□□ -0.34
LITAF-221ENST00000622633 EBF3Q9H4W6 596 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 IP6K2Q9UHH9 426 aa12.91□□□□□ -0.34
LITAF-221ENST00000622633 RBMX2Q9Y388 322 aaKnown RBP12.91□□□□□ -0.34
LITAF-221ENST00000622633 EXOC1LA0A1B0GW35 172 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 F8VP50 259 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 XPOTO43592 962 aaKnown RBP12.9□□□□□ -0.34
LITAF-221ENST00000622633 SUPT20HL2P0C7V6 817 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 PTPN4P29074 926 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 CRABP2P29373 138 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 SLC5A2P31639 672 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 CETN2P41208 172 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 ARSEP51690 589 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 GPS1Q13098 491 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 NCOA4Q13772 614 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 SUPT20HL1Q3ZLR7 823 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 GJC2Q5T442 439 aaPredicted RBP12.9□□□□□ -0.34
LITAF-221ENST00000622633 WDR78Q5VTH9 848 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 TXNRD3NBQ6F5E7 133 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 PPP1R21Q6ZMI0 780 aa12.9□□□□□ -0.34
LITAF-221ENST00000622633 IFNLR1Q8IU57 520 aaPredicted RBP12.9□□□□□ -0.34
LITAF-221ENST00000622633 RAVER1Q8IY67 606 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms