RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 MMRN2Q9H8L6 949 aa9.85□□□□□ -0.83
TARDBP-227ENST00000622057 CSNK1G1Q9HCP0 422 aa9.85□□□□□ -0.83
TARDBP-227ENST00000622057 TMEM74BQ9NUR3 256 aa9.85□□□□□ -0.83
TARDBP-227ENST00000622057 DNAJC17Q9NVM6 304 aaKnown RBP9.85□□□□□ -0.83
TARDBP-227ENST00000622057 MBD1Q9UIS9 605 aaPredicted RBP9.85□□□□□ -0.83
TARDBP-227ENST00000622057 NUDT5Q9UKK9 219 aa9.85□□□□□ -0.83
TARDBP-227ENST00000622057 FRMD4BQ9Y2L6 1034 aa9.85□□□□□ -0.83
TARDBP-227ENST00000622057 ATXN2Q99700 1313 aaKnown RBP9.84□□□□□ -0.83
TARDBP-227ENST00000622057 GREB1Q4ZG55 1949 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 NEDD8-MDP1E9PL57 170 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 IKBKBO14920 756 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 MDM4O15151 490 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 ZBTB24O43167 697 aaPredicted RBP9.84□□□□□ -0.83
TARDBP-227ENST00000622057 HOXC11O43248 304 aaPredicted RBP9.84□□□□□ -0.83
TARDBP-227ENST00000622057 HLA-DRAP01903 254 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 FAM200BP0CF97 657 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 CHRM1P11229 460 aaPredicted RBP9.84□□□□□ -0.83
TARDBP-227ENST00000622057 RARGP13631 454 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 HOXB2P14652 356 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 PFKFB1P16118 471 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 ACO1P21399 889 aaKnown RBP9.84□□□□□ -0.83
TARDBP-227ENST00000622057 ITPKAP23677 461 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 ASPAP45381 313 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 VAMP7P51809 220 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 SHC2P98077 582 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 ZNF252P-AS1Q0IIN9 211 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 LMAN2Q12907 356 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 LYSMD4Q5XG99 296 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 GRAMD4Q6IC98 578 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 CLEC20AQ6ZU45 233 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 TRMT11Q7Z4G4 463 aaKnown RBP9.84□□□□□ -0.83
TARDBP-227ENST00000622057 MIB1Q86YT6 1006 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 SYT12Q8IV01 421 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 TERB1Q8NA31 727 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 DEFB124Q8NES8 71 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 KCNV2Q8TDN2 545 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 BHMTQ93088 406 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 TWNKQ96RR1 684 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 BBS2Q9BXC9 721 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 KLF16Q9BXK1 252 aaPredicted RBP9.84□□□□□ -0.83
TARDBP-227ENST00000622057 NMUR1Q9HB89 426 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 FSCN3Q9NQT6 498 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 OSER1Q9NX31 292 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 LSM7Q9UK45 103 aaKnown RBP9.84□□□□□ -0.83
TARDBP-227ENST00000622057 MAPK8IP1Q9UQF2 711 aa9.84□□□□□ -0.83
TARDBP-227ENST00000622057 ABCA7Q8IZY2 2146 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 EML5Q05BV3 1969 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 A0A1W2PQH9 124 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 CYP26A1O43174 497 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 AP5Z1O43299 807 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 TOP3BO95985 862 aaKnown RBP9.83□□□□□ -0.84
TARDBP-227ENST00000622057 ASS1P00966 412 aaKnown RBP9.83□□□□□ -0.84
TARDBP-227ENST00000622057 TRIM49P0CI25 452 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 TRIM49CP0CI26 452 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 KRT13P13646 458 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 TYRP14679 529 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 ENGP17813 658 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 GABRG2P18507 467 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 CD58P19256 250 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 SPINK2P20155 84 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 CMA1P23946 247 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 NTSR1P30989 418 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 PLA2G4AP47712 749 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 GCLMP48507 274 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 ATXN3P54252 364 aaPredicted RBP9.83□□□□□ -0.84
TARDBP-227ENST00000622057 RPL6Q02878 288 aaKnown RBP9.83□□□□□ -0.84
TARDBP-227ENST00000622057 GOLGA8FQ08AF8 430 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 GOLGA8DPQ0D2H9 430 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 ZNF394Q53GI3 561 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 C1orf220Q5T0J3 134 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 EGFLAMQ63HQ2 1017 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 GPRIN1Q7Z2K8 1008 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 CHPFQ8IZ52 775 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 TMEM174Q8WUU8 243 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 CCDC47Q96A33 483 aaKnown RBP9.83□□□□□ -0.84
TARDBP-227ENST00000622057 ACOX2Q99424 681 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 HNRNPABQ99729 332 aaKnown RBP9.83□□□□□ -0.84
TARDBP-227ENST00000622057 GTPBP2Q9BX10 602 aaKnown RBP9.83□□□□□ -0.84
TARDBP-227ENST00000622057 NT5C1AQ9BXI3 368 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 IMPG2Q9BZV3 1241 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 APOBEC3GQ9HC16 384 aaKnown RBP9.83□□□□□ -0.84
TARDBP-227ENST00000622057 WDR35Q9P2L0 1181 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 EVLQ9UI08 416 aaPredicted RBP9.83□□□□□ -0.84
TARDBP-227ENST00000622057 HCN2Q9UL51 889 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 SCML2Q9UQR0 700 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 TRAF3IP3Q9Y228 551 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 STARD13Q9Y3M8 1113 aa9.83□□□□□ -0.84
TARDBP-227ENST00000622057 A0A1W2PQF6 199 aa9.82□□□□□ -0.84
TARDBP-227ENST00000622057 C1QTNF9BB2RNN3 333 aa9.82□□□□□ -0.84
TARDBP-227ENST00000622057 PRRT4C9JH25 899 aa9.82□□□□□ -0.84
TARDBP-227ENST00000622057 HHLA1C9JL84 531 aa9.82□□□□□ -0.84
TARDBP-227ENST00000622057 GREM1O60565 184 aa9.82□□□□□ -0.84
TARDBP-227ENST00000622057 CFIP05156 583 aa9.82□□□□□ -0.84
TARDBP-227ENST00000622057 HMBSP08397 361 aa9.82□□□□□ -0.84
TARDBP-227ENST00000622057 PRR29P0C7W0 189 aa9.82□□□□□ -0.84
TARDBP-227ENST00000622057 C1QTNF9P0C862 333 aa9.82□□□□□ -0.84
TARDBP-227ENST00000622057 CEACAM1P13688 526 aa9.82□□□□□ -0.84
TARDBP-227ENST00000622057 CSRP1P21291 193 aaKnown RBP9.82□□□□□ -0.84
TARDBP-227ENST00000622057 NR2F2P24468 414 aa9.82□□□□□ -0.84
TARDBP-227ENST00000622057 SYKP43405 635 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms