RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 PATJQ8NI35 1801 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 YJEFN3A6XGL0 299 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 E7ENQ6 273 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 ENDOD1O94919 500 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 GRIK1P39086 918 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 DRICH1Q6PGQ1 229 aaPredicted RBP22.37■■□□□ 1.17
SPAST-204ENST00000621856 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.37■■□□□ 1.17
SPAST-204ENST00000621856 GPR62Q9BZJ7 368 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 PCDH18Q9HCL0 1135 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 PNPLA8Q9NP80 782 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 ABI2Q9NYB9 513 aaPredicted RBP22.37■■□□□ 1.17
SPAST-204ENST00000621856 SYNJ2BP-COX16A0A087WUM0 186 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 NT5C1B-RDH14C9J2C7 533 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 LTFP02788 710 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 GALTP07902 379 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 CYP2F1P24903 491 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 PLTPP55058 493 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 ELAVL2Q12926 359 aaKnown RBP22.37■■□□□ 1.17
SPAST-204ENST00000621856 TFDP2Q14188 446 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 TRIP13Q15645 432 aaPredicted RBP22.37■■□□□ 1.17
SPAST-204ENST00000621856 CA9Q16790 459 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 ZNF280DQ6N043 979 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 FUT10Q6P4F1 479 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 TSEN2Q8NCE0 465 aaKnown RBP22.37■■□□□ 1.17
SPAST-204ENST00000621856 NPY6RQ99463 290 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 FMO2Q99518 471 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 FRMD8P1Q9BZ68 369 aaPredicted RBP22.37■■□□□ 1.17
SPAST-204ENST00000621856 GRHL1Q9NZI5 618 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 COX16Q9P0S2 106 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 NAALADL1Q9UQQ1 740 aa22.37■■□□□ 1.17
SPAST-204ENST00000621856 M0QYT0 321 aa22.36■■□□□ 1.17
SPAST-204ENST00000621856 PBX3P40426 434 aa22.36■■□□□ 1.17
SPAST-204ENST00000621856 VCPP55072 806 aaKnown RBP22.36■■□□□ 1.17
SPAST-204ENST00000621856 OTUD4Q01804 1114 aaKnown RBP22.36■■□□□ 1.17
SPAST-204ENST00000621856 NFE2Q16621 373 aaPredicted RBP22.36■■□□□ 1.17
SPAST-204ENST00000621856 SYPL2Q5VXT5 272 aa22.36■■□□□ 1.17
SPAST-204ENST00000621856 FAM131BQ86XD5 332 aa22.36■■□□□ 1.17
SPAST-204ENST00000621856 ACTL9Q8TC94 416 aa22.36■■□□□ 1.17
SPAST-204ENST00000621856 IRGQQ8WZA9 623 aa22.36■■□□□ 1.17
SPAST-204ENST00000621856 ZBTB9Q96C00 473 aa22.36■■□□□ 1.17
SPAST-204ENST00000621856 DHX35Q9H5Z1 703 aaKnown RBP22.36■■□□□ 1.17
SPAST-204ENST00000621856 PRDM5Q9NQX1 630 aaPredicted RBP22.36■■□□□ 1.17
SPAST-204ENST00000621856 AP4E1Q9UPM8 1137 aa22.36■■□□□ 1.17
SPAST-204ENST00000621856 ATF2P15336 505 aa22.35■■□□□ 1.17
SPAST-204ENST00000621856 FGFR3P22607 806 aa22.35■■□□□ 1.17
SPAST-204ENST00000621856 RDXP35241 583 aaKnown RBP22.35■■□□□ 1.17
SPAST-204ENST00000621856 PITX1P78337 314 aaPredicted RBP22.35■■□□□ 1.17
SPAST-204ENST00000621856 DEUP1Q05D60 604 aa22.35■■□□□ 1.17
SPAST-204ENST00000621856 CALCOCO2Q13137 446 aa22.35■■□□□ 1.17
SPAST-204ENST00000621856 PPP6R3Q5H9R7 873 aaPredicted RBP22.35■■□□□ 1.17
SPAST-204ENST00000621856 SCN4BQ8IWT1 228 aa22.35■■□□□ 1.17
SPAST-204ENST00000621856 MREGQ8N565 214 aa22.35■■□□□ 1.17
SPAST-204ENST00000621856 CCDC185Q8N715 623 aa22.35■■□□□ 1.17
SPAST-204ENST00000621856 NKD2Q969F2 451 aaPredicted RBP22.35■■□□□ 1.17
SPAST-204ENST00000621856 LRRC45Q96CN5 670 aa22.35■■□□□ 1.17
SPAST-204ENST00000621856 B3GALT6Q96L58 329 aa22.35■■□□□ 1.17
SPAST-204ENST00000621856 RNF157Q96PX1 679 aa22.35■■□□□ 1.17
SPAST-204ENST00000621856 ZDHHC18Q9NUE0 388 aa22.35■■□□□ 1.17
SPAST-204ENST00000621856 SAE1Q9UBE0 346 aaPredicted RBP22.35■■□□□ 1.17
SPAST-204ENST00000621856 DRG1Q9Y295 367 aaKnown RBP22.35■■□□□ 1.17
SPAST-204ENST00000621856 OR6C75A6NL08 312 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 APOC4-APOC2K7ER74 178 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 KRT14P02533 472 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 APOC2P02655 101 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 NCAM1P13591 858 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 VPS41P49754 854 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 NME3Q13232 169 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 OTUD1Q5VV17 481 aaPredicted RBP22.34■■□□□ 1.17
SPAST-204ENST00000621856 ZDHHC24Q6UX98 284 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 SLC7A14Q8TBB6 771 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 NT5C3BQ969T7 300 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 SNF8Q96H20 258 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 CALCOCO1Q9P1Z2 691 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 MTRF1LQ9UGC7 380 aaKnown RBP22.34■■□□□ 1.17
SPAST-204ENST00000621856 PCDHB5Q9Y5E4 795 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 FYNP06241 537 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 HSPA9P38646 679 aaKnown RBP22.34■■□□□ 1.17
SPAST-204ENST00000621856 ADCY8P40145 1251 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 FAM193AP78312 1265 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 IFRD2Q12894 506 aaPredicted RBP22.34■■□□□ 1.17
SPAST-204ENST00000621856 MRPL58Q14197 206 aaKnown RBP22.34■■□□□ 1.17
SPAST-204ENST00000621856 PM20D1Q6GTS8 502 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 BHLHA9Q7RTU4 235 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 NECAB2Q7Z6G3 386 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 VSIG1Q86XK7 387 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 SCML4Q8N228 414 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 CCDC89Q8N998 374 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 SLC35B2Q8TB61 432 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 FBXO25Q8TCJ0 367 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 ZNF670Q9BS34 389 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 WHRNQ9P202 907 aa22.34■■□□□ 1.17
SPAST-204ENST00000621856 GOLGA6BA6NDN3 693 aa22.33■■□□□ 1.17
SPAST-204ENST00000621856 ITGAVP06756 1048 aa22.33■■□□□ 1.17
SPAST-204ENST00000621856 L1CAMP32004 1257 aa22.33■■□□□ 1.17
SPAST-204ENST00000621856 ARPP19P56211 112 aa22.33■■□□□ 1.17
SPAST-204ENST00000621856 OASLQ15646 514 aaKnown RBP22.33■■□□□ 1.17
SPAST-204ENST00000621856 DPYSL2Q16555 572 aa22.33■■□□□ 1.17
SPAST-204ENST00000621856 ANKRD20A8PQ5CZ79 823 aa22.33■■□□□ 1.17
SPAST-204ENST00000621856 ALLCQ8N6M5 410 aa22.33■■□□□ 1.17
SPAST-204ENST00000621856 SCAMP5Q8TAC9 235 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms