RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 DNAJC3Q13217 504 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 FAM171A1Q5VUB5 890 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 TMC2Q8TDI7 906 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 DDI1Q8WTU0 396 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 MAGEB10Q96LZ2 347 aaPredicted RBP8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 ANKEF1Q9NU02 776 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 SLC12A4Q9UP95 1085 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 CFAP73A6NFT4 308 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 GSTA4O15217 222 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 MAPK13O15264 365 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 MGRN1O60291 552 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 PROSCO94903 275 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 THP07101 528 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 RFX3P48380 749 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 ALDH5A1P51649 535 aaPredicted RBP8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 SNRPFP62306 86 aaKnown RBP8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 CAV1Q03135 178 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 ENOSF1Q7L5Y1 443 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 FBXO32Q969P5 355 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 RSRC1Q96IZ7 334 aaKnown RBP8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 TIPINQ9BVW5 301 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 F5P12259 2224 aa8.58□□□□□ -1.04
PTPDC1-204ENST00000620992 A8MUI8 341 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 ADCY3O60266 1144 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 PIAS1O75925 651 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 ETS1P14921 441 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 COPS2P61201 443 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 NCALDP61601 193 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 TCEAL1Q15170 157 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 POM121L1PQ3SYA9 428 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 GBP7Q8N8V2 638 aaPredicted RBP8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 FAM71DQ8N9W8 422 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 BLOC1S5Q8TDH9 187 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 GIPC2Q8TF65 315 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 CKAP2Q8WWK9 683 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 DDX27Q96GQ7 796 aaKnown RBP8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 ATXN3LQ9H3M9 355 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 ETNK1Q9HBU6 452 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 CPSF2Q9P2I0 782 aaKnown RBP8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 COQ4Q9Y3A0 265 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 RRN3P2A6NIE6 340 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 APOL1O14791 398 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 CASQ2O14958 399 aaPredicted RBP8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 ZNF862O60290 1169 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 UNGP13051 313 aaPredicted RBP8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 KCNA2P16389 499 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 DSG3P32926 999 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 HARS2P49590 506 aaKnown RBP8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 GCNT1Q02742 428 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 LAMTOR4Q0VGL1 99 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 C6orf10Q5SRN2 563 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 SYDE1Q6ZW31 735 aaPredicted RBP8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 ATPAF2Q8N5M1 289 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 PIP4K2CQ8TBX8 421 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 LENG1Q96BZ8 264 aaPredicted RBP8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 CELF6Q96J87 481 aaKnown RBP8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 MFSD14AQ96MC6 490 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 ADAM2Q99965 735 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 GPR63Q9BZJ6 419 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 SLC13A4Q9UKG4 626 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 NEU2Q9Y3R4 380 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 TELO2Q9Y4R8 837 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 C3orf70A6NLC5 250 aaPredicted RBP8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 EEF2KO00418 725 aaKnown RBP8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 KRT38O76015 456 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 LYPLA2O95372 231 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 ANP32DO95626 131 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 CD4P01730 458 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 MYBL1P10243 752 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 MBL2P11226 248 aaPredicted RBP8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 ESRRAP11474 423 aaPredicted RBP8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 GRIK4Q16099 956 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 SPDYAQ5MJ70 313 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 NIPA1Q7RTP0 329 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 FITM2Q8N6M3 262 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 ZNF516Q92618 1163 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 OTULINQ96BN8 352 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 GPRASP2Q96D09 838 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 DCUN1D1Q96GG9 259 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 ST6GALNAC4Q9H4F1 302 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 DONSONQ9NYP3 566 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 DNPEPQ9ULA0 475 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 CLCA2Q9UQC9 943 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 PPP2R3BQ9Y5P8 575 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 SLC30A1Q9Y6M5 507 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 LTBP4Q8N2S1 1624 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 LTBP1Q14766 1721 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 SLC12A8A0AV02 714 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 SPECC1L-ADORA2AF8WAN1 911 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 MAFGO15525 162 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 ONECUT3O60422 494 aaPredicted RBP8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 CHEK2O96017 543 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 ALDH2P05091 517 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 SPATA31D3P0C874 917 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 PAMP19021 973 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 AVPR1AP37288 418 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 FLT3LGP49771 235 aa8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 GSCP56915 257 aaPredicted RBP8.57□□□□□ -1.04
PTPDC1-204ENST00000620992 RPL7AP62424 266 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms