RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 KRT6AP02538 564 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 LTFP02788 710 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 KRT6BP04259 564 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 GSTT2P0CG29 244 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 GSTT2BP0CG30 244 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 KRT6CP48668 564 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 BRSK2Q8IWQ3 736 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 TBX10O75333 385 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 TOP3BO95985 862 aaKnown RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 FAM69CQ0P6D2 419 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 RDM1Q8NG50 284 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 RBM17Q96I25 401 aaKnown RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 APOL2Q9BQE5 337 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 PHF20Q9BVI0 1012 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 ACAT2Q9BWD1 397 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 CUEDC1Q9NWM3 386 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 FAM8A1Q9UBU6 413 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 RUVBL2Q9Y230 463 aaKnown RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 RNASEH1O60930 286 aaKnown RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 ZNF682O95780 498 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 ITGA9Q13797 1035 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 GK3PQ14409 553 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 DGUOKQ16854 277 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 PITRM1Q5JRX3 1037 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 SPDYAQ5MJ70 313 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 FRMD5Q7Z6J6 570 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 PGM2Q96G03 612 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 DUSP9Q99956 384 aaKnown RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 ZNF577Q9BSK1 485 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 THUMPD3Q9BV44 507 aaKnown RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 MAGI1Q96QZ7 1491 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 CSDE1O75534 798 aaKnown RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 MZF1P28698 734 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 MMP13P45452 471 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 NDUFA5Q16718 116 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 PDCD4Q53EL6 469 aaKnown RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 SYDE1Q6ZW31 735 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 CENPLQ8N0S6 344 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 FAM47BQ8NA70 645 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 MAGEE2Q8TD90 523 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 SPDYE2BA6NHP3 402 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 KIAA0391O15091 583 aaKnown RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 SPDYE6P0CI01 402 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 ENTPD1P49961 510 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 SNX17Q15036 470 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 CYP51A1Q16850 503 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 SLFN13Q68D06 897 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 TBC1D14Q9P2M4 693 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 UHRF1BP1LA0JNW5 1464 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 HSPA1AP0DMV8 641 aaKnown RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 HSPA1BP0DMV9 641 aaKnown RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 COX4I1P13073 169 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 TTLL12Q14166 644 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 PTK2BQ14289 1009 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 ZNF846Q147U1 533 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 ARSHQ5FYA8 562 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 SLC22A16Q86VW1 577 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 APBA2Q99767 749 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 STARD7Q9NQZ5 370 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 DNAJC28Q9NX36 388 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 SERPINB13Q9UIV8 391 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 CDY2AQ9Y6F7 541 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 CDY1Q9Y6F8 540 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 GSG1L2A8MUP6 293 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 H0YJX3 145 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 FKBP6O75344 327 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 PEX14O75381 377 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 RGS7P49802 495 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 KIZQ2M2Z5 673 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 NADK2Q4G0N4 442 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 ARHGAP27Q6ZUM4 889 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 FBXW8Q8N3Y1 598 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 REEP2Q9BRK0 252 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 FAM20BO75063 409 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 CCNA2P20248 432 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 FDFT1P37268 417 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 SLC10A5Q5PT55 438 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 KCTD8Q6ZWB6 473 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 OR8H1Q8NGG4 311 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 TBCDQ9BTW9 1192 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 ZNF717Q9BY31 904 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 HSD3B7Q9H2F3 369 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 WDR41Q9HAD4 459 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 CLK4Q9HAZ1 481 aaKnown RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 GPATCH2LQ9NWQ4 482 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 CLEC4AQ9UMR7 237 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 ABCC1P33527 1531 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 TLR2O60603 784 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 FKBP9O95302 570 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 GDF11O95390 407 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 CCNCP24863 283 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 FKBP9P1Q75LS8 142 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 COQ10BQ9H8M1 238 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 UBP1Q9NZI7 540 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 NAGPAQ9UK23 515 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 GNEQ9Y223 722 aaKnown RBP5.19□□□□□ -1.58
VPS13D-214ENST00000620676 ARHGEF40Q8TER5 1519 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 PLCH2O75038 1416 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 A0A0J9YVX5 310 aa5.19□□□□□ -1.58
VPS13D-214ENST00000620676 A8MXQ7 604 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms