RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 H2AFYO75367 372 aaKnown RBP8.62□□□□□ -1.03
ALMS1-208ENST00000620466 SKAP2O75563 359 aaPredicted RBP8.62□□□□□ -1.03
ALMS1-208ENST00000620466 RPL10AP62906 217 aaKnown RBP8.62□□□□□ -1.03
ALMS1-208ENST00000620466 PTPN11Q06124 597 aaPredicted RBP8.62□□□□□ -1.03
ALMS1-208ENST00000620466 KPNB1Q14974 876 aaKnown RBP8.62□□□□□ -1.03
ALMS1-208ENST00000620466 ARHGAP15Q53QZ3 475 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 GLRA4Q5JXX5 417 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 APLFQ8IW19 511 aaPredicted RBP8.62□□□□□ -1.03
ALMS1-208ENST00000620466 IQCKQ8N0W5 287 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 CNPY3Q9BT09 278 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 PCDHGB4Q9UN71 923 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 ARHGAP26Q9UNA1 814 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 RARBP10826 455 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 ALADP13716 330 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 CYP2F1P24903 491 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 FKBP1AP62942 108 aaKnown RBP8.62□□□□□ -1.03
ALMS1-208ENST00000620466 DAB2P98082 770 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 SREBF2Q12772 1141 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 STARD13Q9Y3M8 1113 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 DTNAQ9Y4J8 743 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 RPS6KL1Q9Y6S9 549 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 KCPQ6ZWJ8 1503 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 RGPD2P0DJD1 1756 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 VWA5AO00534 786 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 ZNF197O14709 1029 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 DYNC1LI2O43237 492 aaPredicted RBP8.62□□□□□ -1.03
ALMS1-208ENST00000620466 LIASO43766 372 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 NCAM1P13591 858 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 GFAPP14136 432 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 RPS12P25398 132 aaKnown RBP8.62□□□□□ -1.03
ALMS1-208ENST00000620466 CPT1AP50416 773 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 DDR1Q08345 913 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 PREPLQ4J6C6 727 aaPredicted RBP8.62□□□□□ -1.03
ALMS1-208ENST00000620466 ARMC6Q6NXE6 501 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 STX19Q8N4C7 294 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 AP4E1Q9UPM8 1137 aa8.62□□□□□ -1.03
ALMS1-208ENST00000620466 RUVBL2Q9Y230 463 aaKnown RBP8.62□□□□□ -1.03
ALMS1-208ENST00000620466 F8VP50 259 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 NPM3O75607 178 aaKnown RBP8.61□□□□□ -1.03
ALMS1-208ENST00000620466 VTNP04004 478 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 ZCCHC18P0CG32 403 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 CNTFP26441 200 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 OR1G1P47890 313 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 GCLCP48506 637 aaPredicted RBP8.61□□□□□ -1.03
ALMS1-208ENST00000620466 CENPAP49450 140 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 JAM2P57087 298 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 CCDC85BQ15834 202 aaPredicted RBP8.61□□□□□ -1.03
ALMS1-208ENST00000620466 RNF43Q68DV7 783 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 IZUMO2Q6UXV1 221 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 DTNBP1Q96EV8 351 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 IARS2Q9NSE4 1012 aaKnown RBP8.61□□□□□ -1.03
ALMS1-208ENST00000620466 CD274Q9NZQ7 290 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 KLK14Q9P0G3 267 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 ADGRA2Q96PE1 1338 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 BANF1O75531 89 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 C6orf222P0C671 652 aaPredicted RBP8.61□□□□□ -1.03
ALMS1-208ENST00000620466 CYP2C8P10632 490 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 CYP2B6P20813 491 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 FAAP100Q0VG06 881 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 SETD3Q86TU7 594 aaPredicted RBP8.61□□□□□ -1.03
ALMS1-208ENST00000620466 EXOC3L1Q86VI1 746 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 AGAP11Q8TF27 550 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 CCDC134Q9H6E4 229 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 DISP2A7MBM2 1401 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 ADRA1DP25100 572 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 KCNJ2P63252 427 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 SLC9A9Q8IVB4 645 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 NUP93Q8N1F7 819 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 ILKAPQ9H0C8 392 aaPredicted RBP8.61□□□□□ -1.03
ALMS1-208ENST00000620466 FCHO1O14526 889 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 HIST1H2AGP0C0S8 130 aaPredicted RBP8.61□□□□□ -1.03
ALMS1-208ENST00000620466 HIST1H2ADP20671 130 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 SLC1A6P48664 564 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 DRG2P55039 364 aaKnown RBP8.61□□□□□ -1.03
ALMS1-208ENST00000620466 CDK16Q00536 496 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 NOTUMQ6P988 496 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 ALLCQ8N6M5 410 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 HIST1H2AHQ96KK5 128 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 HIST1H2AJQ99878 128 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 H2AFJQ9BTM1 129 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 KIAA1257Q9ULG3 409 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 WDR27A2RRH5 827 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 SERPINB3P29508 390 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 ETFBP38117 255 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 TAF6P49848 677 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 NCKAP1LP55160 1127 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 PRKCQQ04759 706 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 LY6KQ17RY6 165 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 SHROOM1Q2M3G4 852 aaPredicted RBP8.61□□□□□ -1.03
ALMS1-208ENST00000620466 NAPEPLDQ6IQ20 393 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 LAYNQ6UX15 382 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 SLFN11Q7Z7L1 901 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 FBXO16Q8IX29 292 aaPredicted RBP8.61□□□□□ -1.03
ALMS1-208ENST00000620466 CERKQ8TCT0 537 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 CYGBQ8WWM9 190 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 KLHL4Q9C0H6 718 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 KIAA1683Q9H0B3 1180 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 RUBCNLQ9H714 662 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 IL1RL2Q9HB29 575 aa8.61□□□□□ -1.03
ALMS1-208ENST00000620466 LRG1P02750 347 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms