RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 RTN2O75298 545 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 OLFM2O95897 454 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 LTFP02788 710 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 CALB1P05937 261 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 IL9P15248 144 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 PFKLP17858 780 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 ARHGAP15Q53QZ3 475 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 GPR158Q5T848 1215 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 TXNDC8Q6A555 127 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 OR6B2Q6IFH4 312 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 TOGARAM2Q6ZUX3 1019 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 HFE2Q6ZVN8 426 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 MCOLN2Q8IZK6 566 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 ANP32BQ92688 251 aaKnown RBP20.67■□□□□ 0.9
UPF3A-211ENST00000618700 MCRS1Q96EZ8 462 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 CCDC42Q96M95 316 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 ASB2Q96Q27 587 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 DEF6Q9H4E7 631 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 TASP1Q9H6P5 420 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.67■□□□□ 0.9
UPF3A-211ENST00000618700 ASNSD1Q9NWL6 643 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 ZMYM5Q9UJ78 669 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 STRIP2Q9ULQ0 834 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 USTQ9Y2C2 406 aa20.67■□□□□ 0.9
UPF3A-211ENST00000618700 TMCO5BA8MYB1 307 aa20.66■□□□□ 0.9
UPF3A-211ENST00000618700 GLI1P08151 1106 aa20.66■□□□□ 0.9
UPF3A-211ENST00000618700 KCNQ1P51787 676 aa20.66■□□□□ 0.9
UPF3A-211ENST00000618700 SLC6A3Q01959 620 aa20.66■□□□□ 0.9
UPF3A-211ENST00000618700 GFPT1Q06210 699 aaPredicted RBP20.66■□□□□ 0.9
UPF3A-211ENST00000618700 ZNF268Q14587 947 aaPredicted RBP20.66■□□□□ 0.9
UPF3A-211ENST00000618700 TAF5Q15542 800 aa20.66■□□□□ 0.9
UPF3A-211ENST00000618700 BSPRYQ5W0U4 402 aa20.66■□□□□ 0.9
UPF3A-211ENST00000618700 ALKBH5Q6P6C2 394 aaKnown RBP20.66■□□□□ 0.9
UPF3A-211ENST00000618700 BEND5Q7L4P6 421 aa20.66■□□□□ 0.9
UPF3A-211ENST00000618700 OTOP3Q7RTS5 596 aa20.66■□□□□ 0.9
UPF3A-211ENST00000618700 DNAAF5Q86Y56 855 aa20.66■□□□□ 0.9
UPF3A-211ENST00000618700 TMTC1Q8IUR5 882 aa20.66■□□□□ 0.9
UPF3A-211ENST00000618700 CCDC170Q8IYT3 715 aa20.66■□□□□ 0.9
UPF3A-211ENST00000618700 ZNF276Q8N554 614 aa20.66■□□□□ 0.9
UPF3A-211ENST00000618700 KHSRPQ92945 711 aaKnown RBP eCLIP20.66■□□□□ 0.99e-6■□□□□ 8.8
UPF3A-211ENST00000618700 VCPIP1Q96JH7 1222 aa20.66■□□□□ 0.9
UPF3A-211ENST00000618700 SLC46A2Q9BY10 475 aa20.66■□□□□ 0.9
UPF3A-211ENST00000618700 CCSER2Q9H7U1 834 aa20.66■□□□□ 0.9
UPF3A-211ENST00000618700 WDR35Q9P2L0 1181 aa20.66■□□□□ 0.9
UPF3A-211ENST00000618700 TCRBV5S1A1TA0A578 114 aa20.65■□□□□ 0.9
UPF3A-211ENST00000618700 AKR1B10O60218 316 aa20.65■□□□□ 0.9
UPF3A-211ENST00000618700 TLR5O60602 858 aa20.65■□□□□ 0.9
UPF3A-211ENST00000618700 ABL1P00519 1130 aa20.65■□□□□ 0.9
UPF3A-211ENST00000618700 FTLP02792 175 aaPredicted RBP20.65■□□□□ 0.9
UPF3A-211ENST00000618700 FYNP06241 537 aa20.65■□□□□ 0.9
UPF3A-211ENST00000618700 RARGP13631 454 aa20.65■□□□□ 0.9
UPF3A-211ENST00000618700 WEE1P30291 646 aa20.65■□□□□ 0.9
UPF3A-211ENST00000618700 TJAP1Q5JTD0 557 aa20.65■□□□□ 0.9
UPF3A-211ENST00000618700 EFHC1Q5JVL4 640 aa20.65■□□□□ 0.9
UPF3A-211ENST00000618700 HECTD3Q5T447 861 aa20.65■□□□□ 0.9
UPF3A-211ENST00000618700 ZSWIM3Q96MP5 696 aa20.65■□□□□ 0.9
UPF3A-211ENST00000618700 BAG1Q99933 345 aaPredicted RBP20.65■□□□□ 0.9
UPF3A-211ENST00000618700 SLITRK6Q9H5Y7 841 aa20.65■□□□□ 0.9
UPF3A-211ENST00000618700 ABCC13Q9NSE7 274 aa20.65■□□□□ 0.9
UPF3A-211ENST00000618700 SPTLC3Q9NUV7 552 aa20.65■□□□□ 0.9
UPF3A-211ENST00000618700 EPS15L1Q9UBC2 864 aa20.65■□□□□ 0.9
UPF3A-211ENST00000618700 ZFP37Q9Y6Q3 630 aaPredicted RBP20.65■□□□□ 0.9
UPF3A-211ENST00000618700 UNC80Q8N2C7 3258 aa20.65■□□□□ 0.9
UPF3A-211ENST00000618700 NUP210Q8TEM1 1887 aaPredicted RBP20.64■□□□□ 0.9
UPF3A-211ENST00000618700 SOWAHDA6NJG2 315 aa20.64■□□□□ 0.89
UPF3A-211ENST00000618700 COCHO43405 550 aa20.64■□□□□ 0.89
UPF3A-211ENST00000618700 HSF2BPO75031 334 aa20.64■□□□□ 0.89
UPF3A-211ENST00000618700 LAMP2P13473 410 aa20.64■□□□□ 0.89
UPF3A-211ENST00000618700 GBP2P32456 591 aaPredicted RBP20.64■□□□□ 0.89
UPF3A-211ENST00000618700 CCDC122Q5T0U0 273 aa20.64■□□□□ 0.89
UPF3A-211ENST00000618700 FAM102AQ5T9C2 384 aaPredicted RBP20.64■□□□□ 0.89
UPF3A-211ENST00000618700 BTBD8Q5XKL5 378 aa20.64■□□□□ 0.89
UPF3A-211ENST00000618700 KLHDC10Q6PID8 442 aa20.64■□□□□ 0.89
UPF3A-211ENST00000618700 CMTM8Q8IZV2 173 aa20.64■□□□□ 0.89
UPF3A-211ENST00000618700 ARL14EPQ8N8R7 260 aaPredicted RBP20.64■□□□□ 0.89
UPF3A-211ENST00000618700 MAB21L3Q8N8X9 362 aa20.64■□□□□ 0.89
UPF3A-211ENST00000618700 TDRD5Q8NAT2 981 aaKnown RBP20.64■□□□□ 0.89
UPF3A-211ENST00000618700 C3orf20Q8ND61 904 aa20.64■□□□□ 0.89
UPF3A-211ENST00000618700 FAM149B1Q96BN6 582 aa20.64■□□□□ 0.89
UPF3A-211ENST00000618700 TRIM11Q96F44 468 aa20.64■□□□□ 0.89
UPF3A-211ENST00000618700 SLC2A13Q96QE2 648 aa20.64■□□□□ 0.89
UPF3A-211ENST00000618700 SLC22A12Q96S37 553 aa20.64■□□□□ 0.89
UPF3A-211ENST00000618700 CDK5RAP1Q96SZ6 601 aaKnown RBP20.64■□□□□ 0.89
UPF3A-211ENST00000618700 TRIM62Q9BVG3 475 aa20.64■□□□□ 0.89
UPF3A-211ENST00000618700 RNF38Q9H0F5 515 aa20.64■□□□□ 0.89
UPF3A-211ENST00000618700 POPDC2Q9HBU9 364 aa20.64■□□□□ 0.89
UPF3A-211ENST00000618700 TRPC7Q9HCX4 862 aa20.64■□□□□ 0.89
UPF3A-211ENST00000618700 TRAV19A0A0A6YYK7 116 aa20.63■□□□□ 0.89
UPF3A-211ENST00000618700 C2CD4DB7Z1M9 353 aa20.63■□□□□ 0.89
UPF3A-211ENST00000618700 GOLGA8SH3BPF8 625 aa20.63■□□□□ 0.89
UPF3A-211ENST00000618700 ZNF263O14978 683 aa20.63■□□□□ 0.89
UPF3A-211ENST00000618700 DAB1O75553 588 aa20.63■□□□□ 0.89
UPF3A-211ENST00000618700 LCA5LO95447 670 aa20.63■□□□□ 0.89
UPF3A-211ENST00000618700 RALAP11233 206 aa20.63■□□□□ 0.89
UPF3A-211ENST00000618700 RRM1P23921 792 aa20.63■□□□□ 0.89
UPF3A-211ENST00000618700 YWHAZP63104 245 aaKnown RBP20.63■□□□□ 0.89
UPF3A-211ENST00000618700 MSANTD2Q6P1R3 559 aa20.63■□□□□ 0.89
UPF3A-211ENST00000618700 ZSCAN18Q8TBC5 510 aaPredicted RBP20.63■□□□□ 0.89
UPF3A-211ENST00000618700 EDEM1Q92611 657 aa20.63■□□□□ 0.89
UPF3A-211ENST00000618700 GOLGA1Q92805 767 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms