RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 RWDD3Q9Y3V2 267 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 LRRD1A4D1F6 860 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 FAM86C2PA6NEL3 165 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 PIK3R2O00459 728 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 NDC80O14777 642 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 HCRTO43612 131 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 LRCH4O75427 683 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 F9P00740 461 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 GALTP07902 379 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 FGFR3P22607 806 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 TKTP29401 623 aaKnown RBP17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 NOS2P35228 1153 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 LTBRP36941 435 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 GRIK1P39086 918 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 MATKP42679 507 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 SLC11A1P49279 550 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 BCAR1P56945 870 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 BTG3Q14201 252 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 USP41Q3LFD5 358 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 TFDP3Q5H9I0 405 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 VARS2Q5ST30 1063 aaKnown RBP17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 DCAF12L1Q5VU92 463 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 KIAA1841Q6NSI8 718 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 CD300LGQ6UXG3 332 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 SYDE1Q6ZW31 735 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 CMTR2Q8IYT2 770 aaKnown RBP17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 ARHGAP18Q8N392 663 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 SPPL2BQ8TCT7 592 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 HNRNPLLQ8WVV9 542 aaKnown RBP17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 TEKT4Q8WW24 435 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 FAM122AQ96E09 287 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 LRRC1Q9BTT6 524 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 TTPALQ9BTX7 342 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 ZCWPW1Q9H0M4 648 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 ZWILCHQ9H900 591 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 PRDM16Q9HAZ2 1276 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 POPDC2Q9HBU9 364 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 TJP2Q9UDY2 1190 aa17.52■□□□□ 0.4
TRAPPC3-210ENST00000617904 TULP2O00295 520 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 ATP8B1O43520 1251 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 GAS8O95995 478 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 ZBED1O96006 694 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 CPB1P15086 417 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 BDNFP23560 247 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 PPM1AP35813 382 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 MAGEA11P43364 429 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 MARCKSL1P49006 195 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 AIF1P55008 147 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 TAS2R40P59535 323 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 DR1Q01658 176 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 CUL1Q13616 776 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 TFDP2Q14188 446 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 KRT81Q14533 505 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 NAA30Q147X3 362 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 CTC1Q2NKJ3 1217 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 SCYL2Q6P3W7 929 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 VSIG1Q86XK7 387 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 CCDC105Q8IYK2 499 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 EIF1ADQ8N9N8 165 aaKnown RBP17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 TMEM169Q96HH4 297 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 LPIN3Q9BQK8 851 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 DDX23Q9BUQ8 820 aaKnown RBP17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 ANKZF1Q9H8Y5 726 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 CLDND1Q9NY35 253 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 SMARCAL1Q9NZC9 954 aa17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 ARIH1Q9Y4X5 557 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC3-210ENST00000617904 GRAP2O75791 330 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 HEXIM1O94992 359 aaKnown RBP17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 TRUB2O95900 331 aaKnown RBP17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 H2AFXP16104 143 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 MIPP30301 263 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 SULT1E1P49888 294 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 RPL10AP62906 217 aaKnown RBP17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 OGDHQ02218 1023 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 CREMQ03060 361 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 ZNF252P-AS1Q0IIN9 211 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 HYAL1Q12794 435 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 CAMK1Q14012 370 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 ARL13BQ3SXY8 428 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 SLC25A52Q3SY17 297 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 SLC39A12Q504Y0 691 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 RAB41Q5JT25 222 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 KIAA0319Q5VV43 1072 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 SPOCD1Q6ZMY3 1216 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 EP400NLQ6ZTU2 488 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 PAQR9Q6ZVX9 377 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 PSTKQ8IV42 348 aaKnown RBP17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 CCHCR1Q8TD31 782 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 FAM172AQ8WUF8 416 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 RNF25Q96BH1 459 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 SMOQ99835 787 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 RTP3Q9BQQ7 232 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 FBXO44Q9H4M3 255 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 FAM114A2Q9NRY5 505 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 COMMD8Q9NX08 183 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 SSX2IPQ9Y2D8 614 aa17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 MRPL42Q9Y6G3 142 aaKnown RBP17.5■□□□□ 0.39
TRAPPC3-210ENST00000617904 ITGB1P05556 798 aa17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 RALAP11233 206 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms