RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 DNAJB7Q7Z6W7 309 aaPredicted RBP8.44□□□□□ -1.06
TARDBP-219ENST00000617757 SCD5Q86SK9 330 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 RBM23Q86U06 439 aaKnown RBP8.44□□□□□ -1.06
TARDBP-219ENST00000617757 ITIH5Q86UX2 942 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 NT5DC3Q86UY8 548 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 NIPA2Q8N8Q9 360 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.44□□□□□ -1.06
TARDBP-219ENST00000617757 OVCA2Q8WZ82 227 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 CENPIQ92674 756 aaPredicted RBP8.44□□□□□ -1.06
TARDBP-219ENST00000617757 GOLGA1Q92805 767 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 FBXO32Q969P5 355 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 NT5C3BQ969T7 300 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 PSMG2Q969U7 264 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 TRMT2BQ96GJ1 504 aaKnown RBP8.44□□□□□ -1.06
TARDBP-219ENST00000617757 MYRFLQ96LU7 910 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 CFAP57Q96MR6 1250 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 SLITRK1Q96PX8 696 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 CNPY3Q9BT09 278 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 TLE6Q9H808 572 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 NMUR1Q9HB89 426 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 TLR8Q9NR97 1041 aaKnown RBP8.44□□□□□ -1.06
TARDBP-219ENST00000617757 ABCC13Q9NSE7 274 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 GMIPQ9P107 970 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 DNAI1Q9UI46 699 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 AMFRQ9UKV5 643 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 NAALADL1Q9UQQ1 740 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 USTQ9Y2C2 406 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 JRKLQ9Y4A0 524 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 HYOU1Q9Y4L1 999 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 ASB3Q9Y575 518 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 HCFC2Q9Y5Z7 792 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 NUP210Q8TEM1 1887 aaPredicted RBP8.44□□□□□ -1.06
TARDBP-219ENST00000617757 CDH23Q9H251 3354 aa8.44□□□□□ -1.06
TARDBP-219ENST00000617757 TMEM265A0A087WTH1 108 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 ENC1O14682 589 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 CAPN9O14815 690 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 NCK2O43639 380 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 SPOPO43791 374 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 ZMYND10O75800 440 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 ENDOD1O94919 500 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 ATP1A1P05023 1023 aaKnown RBP8.43□□□□□ -1.06
TARDBP-219ENST00000617757 NCAM1P13591 858 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 TFE3P19532 575 aaPredicted RBP8.43□□□□□ -1.06
TARDBP-219ENST00000617757 SLC1A1P43005 524 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 NRIP1P48552 1158 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 PSEN1P49768 467 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 SULT1E1P49888 294 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 TAF12Q16514 161 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 CDO1Q16878 200 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 SLC25A52Q3SY17 297 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 RAB6CQ53S08 254 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 DCAF6Q58WW2 860 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 SH3PXD2AQ5TCZ1 1133 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 OTUD1Q5VV17 481 aaPredicted RBP8.43□□□□□ -1.06
TARDBP-219ENST00000617757 SNX30Q5VWJ9 437 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 BNIPLQ7Z465 357 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 ARHGAP18Q8N392 663 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 ARFGAP1Q8N6T3 406 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 PDZD8Q8NEN9 1154 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 FAM172AQ8WUF8 416 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 EDEM1Q92611 657 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 CD101Q93033 1021 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 HES6Q96HZ4 224 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 ZNF512Q96ME7 567 aaPredicted RBP8.43□□□□□ -1.06
TARDBP-219ENST00000617757 TBCBQ99426 244 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 NPY6RQ99463 290 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 CDCA3Q99618 268 aaPredicted RBP8.43□□□□□ -1.06
TARDBP-219ENST00000617757 NAPGQ99747 312 aaPredicted RBP8.43□□□□□ -1.06
TARDBP-219ENST00000617757 TRIM62Q9BVG3 475 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 TLR10Q9BXR5 811 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 ADAM33Q9BZ11 813 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 RAB6CQ9H0N0 254 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 TTYH1Q9H313 450 aaPredicted RBP8.43□□□□□ -1.06
TARDBP-219ENST00000617757 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.43□□□□□ -1.06
TARDBP-219ENST00000617757 OSER1Q9NX31 292 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 RRN3Q9NYV6 651 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 CLIC5Q9NZA1 410 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 LMCD1Q9NZU5 365 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 CALCOCO1Q9P1Z2 691 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 UXTQ9UBK9 157 aaPredicted RBP8.43□□□□□ -1.06
TARDBP-219ENST00000617757 DPP7Q9UHL4 492 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 STAP1Q9ULZ2 295 aa8.43□□□□□ -1.06
TARDBP-219ENST00000617757 PACSIN2Q9UNF0 486 aaPredicted RBP8.43□□□□□ -1.06
TARDBP-219ENST00000617757 LAMA3Q16787 3333 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 M0QYT0 321 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 CCL16O15467 120 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 LRCH4O75427 683 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 RFPL2O75678 378 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 RNF8O76064 485 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 TRUB2O95900 331 aaKnown RBP8.42□□□□□ -1.06
TARDBP-219ENST00000617757 F11P03951 625 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 HNRNPA1P09651 372 aaKnown RBP eCLIP8.42□□□□□ -1.06
TARDBP-219ENST00000617757 RALAP11233 206 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 RARGP13631 454 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 TCF4P15884 667 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 PTPN2P17706 415 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 CTNNA2P26232 953 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 HOXA9P31269 272 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 CASQ1P31415 396 aa8.42□□□□□ -1.06
TARDBP-219ENST00000617757 CTNNA1P35221 906 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms