RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 DAB1O75553 588 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 SKIP12755 728 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 L1CAMP32004 1257 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 RPL22P35268 128 aaKnown RBP18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 SULT1E1P49888 294 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 PITX1P78337 314 aaPredicted RBP18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 GUCY1A3Q02108 690 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 MORF4L2Q15014 288 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 DCAF6Q58WW2 860 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 LEKR1Q6ZMV7 388 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 GPRIN1Q7Z2K8 1008 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 MYCBPAPQ8TBZ2 947 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 C9orf72Q96LT7 481 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 TSEN34Q9BSV6 310 aaKnown RBP18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 TMEM109Q9BVC6 243 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 UBN1Q9NPG3 1134 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 STARD7Q9NQZ5 370 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 AP4E1Q9UPM8 1137 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 APOL1O14791 398 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 CAPN15O75808 1086 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 ITGB1P05556 798 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 YY1P25490 414 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 PCSK1P29120 753 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 CTCFP49711 727 aaPredicted RBP18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 YWHAZP63104 245 aaKnown RBP18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 ROR1Q01973 937 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 DARS2Q6PI48 645 aaKnown RBP18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 LRRC31Q6UY01 552 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 HFE2Q6ZVN8 426 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 ZMIZ2Q8NF64 920 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 PGM2Q96G03 612 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 ZNF670Q9BS34 389 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 ULBP1Q9BZM6 244 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 HEY1Q9Y5J3 304 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 NRP1O14786 923 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 RASGRF2O14827 1237 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 MAP3K6O95382 1288 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 APLP1P51693 650 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 DPYSL2Q16555 572 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 LONRF1Q17RB8 773 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 SLC25A52Q3SY17 297 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 FAM182AQ5T1J6 154 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 OTUD1Q5VV17 481 aaPredicted RBP18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 STRADAQ7RTN6 431 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 FAM131BQ86XD5 332 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 LINC01599Q8WXQ3 324 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 PRCCQ92733 491 aaPredicted RBP18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 FOXP3Q9BZS1 431 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 SAYSD1Q9NPB0 183 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 MTMR10Q9NXD2 777 aa18.06■□□□□ 0.48
PCDHGC3-205ENST00000617641 H7C0C1 242 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 RGS16O15492 202 aaPredicted RBP18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 CYP2F1P24903 491 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 MAGEA4P43358 317 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 ATP5OP48047 213 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 VEGFBP49765 207 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 BCAR1P56945 870 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 C6orf118Q5T5N4 469 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 SLC9A4Q6AI14 798 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 CTU1Q7Z7A3 348 aaKnown RBP18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 RELL1Q8IUW5 271 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 SLC43A3Q8NBI5 491 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 MYLPFQ96A32 169 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 FAF2Q96CS3 445 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 KCTD15Q96SI1 283 aaPredicted RBP18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 RGS18Q9NS28 235 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 SHOC2Q9UQ13 582 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 FARP1Q9Y4F1 1045 aaPredicted RBP18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 FRMPD3Q5JV73 1810 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 SYNJ2BP-COX16A0A087WUM0 186 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 C9IYK1 514 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 GOLGA8MH3BSY2 632 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 GNRH1P01148 92 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 TGM2P21980 687 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 PPP2R2AP63151 447 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 IFI35P80217 286 aaPredicted RBP18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 HP1BP3Q5SSJ5 553 aaPredicted RBP18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 SYPL2Q5VXT5 272 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 ANKRD22Q5VYY1 191 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 METTL23Q86XA0 190 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 VSIG1Q86XK7 387 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 PYROXD2Q8N2H3 581 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 SLAIN1Q8ND83 568 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 RSPH1Q8WYR4 309 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 CPT1BQ92523 772 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 NRDE2Q9H7Z3 1164 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 COX16Q9P0S2 106 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 PTCH2Q9Y6C5 1203 aa18.05■□□□□ 0.48
PCDHGC3-205ENST00000617641 M0QZQ0 153 aa18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 B4GALT3O60512 393 aa18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 CYP11A1P05108 521 aa18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 GRK4P32298 578 aa18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 NOS2P35228 1153 aa18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 GAD2Q05329 585 aa18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 FASTKD3Q14CZ7 662 aaKnown RBP18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 ARFGAP2Q8N6H7 521 aa18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 SMARCD1Q96GM5 515 aa18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 SLC2A13Q96QE2 648 aa18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 TMEM209Q96SK2 561 aa18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 RABEP2Q9H5N1 569 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms