RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 CSHL1Q14406 222 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 FAM98BQ52LJ0 330 aaKnown RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 TCHHL1Q5QJ38 904 aaPredicted RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 FBXO42Q6P3S6 717 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 CBWD2Q8IUF1 395 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 GDPD5Q8WTR4 605 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 CHP1Q99653 195 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 EPB41L4AQ9HCS5 686 aaPredicted RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 BCLAF3A2AJT9 711 aaKnown RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 PTGES3LE9PB15 166 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 F5H5T6 163 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 KPNA4O00629 521 aaPredicted RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 ATP9AO75110 1047 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 HLA-DRAP01903 254 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 FAM200BP0CF97 657 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 PTPN1P18031 435 aaKnown RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 ITGB6P18564 788 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 YY1P25490 414 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 KPNA1P52294 538 aaPredicted RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 ERMARDQ5T6L9 678 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 ATF7IP2Q5U623 682 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 PRMT9Q6P2P2 845 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 CACUL1Q86Y37 369 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 DEFB107AQ8IZN7 70 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 RHOBTB2Q9BYZ6 727 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 ROPN1BQ9BZX4 212 aaPredicted RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 PAIP1Q9H074 479 aaKnown RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 OSBPL3Q9H4L5 887 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 ROPN1Q9HAT0 212 aaPredicted RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 KANSL1LA0AUZ9 987 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 KIAA0391O15091 583 aaKnown RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 UBDO15205 165 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 EXTL3O43909 919 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 RBMXL2O75526 392 aaKnown RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 CD4P01730 458 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 STAT5AP42229 794 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 GEMP55040 296 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 ZC2HC1CQ53FD0 456 aaPredicted RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 EFHC1Q5JVL4 640 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 FICDQ9BVA6 458 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 AGPAT5Q9NUQ2 364 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 COMMD9Q9P000 198 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 BTBD7Q9P203 1132 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 ZNF112Q9UJU3 913 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 ZNF222Q9UK12 451 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 TBX22Q9Y458 520 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 F5H6K3 240 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 H3BMM5 538 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 HK2P52789 917 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 KLRC3Q07444 240 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 FCHO2Q0JRZ9 810 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 AGKQ53H12 422 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 CLEC4GQ6UXB4 293 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 CCNI2Q6ZMN8 369 aaPredicted RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 NANOGNBQ7Z5D8 188 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 ATG4AQ8WYN0 398 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 CENPIQ92674 756 aaPredicted RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 RORBQ92753 470 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 CATSPER2Q96P56 530 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 KATNAL1Q9BW62 490 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 DGCR6LQ9BY27 220 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 SEMA6AQ9H2E6 1030 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 SLC35C2Q9NQQ7 365 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 PHF11Q9UIL8 331 aa6.18□□□□□ -1.42
RFX3-212ENST00000617270 RPAP1Q9BWH6 1393 aaPredicted RBP6.18□□□□□ -1.42
RFX3-212ENST00000617270 M0QYT0 321 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 TBC1D12O60347 775 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 ZNF24P17028 368 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 EIF2S3P41091 472 aaKnown RBP6.17□□□□□ -1.42
RFX3-212ENST00000617270 SLC11A2P49281 568 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 PURAQ00577 322 aaKnown RBP6.17□□□□□ -1.42
RFX3-212ENST00000617270 MIIPQ5JXC2 388 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 SUSD4Q5VX71 490 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 IER5Q5VY09 327 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 RASGRP2Q7LDG7 609 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 ZNF605Q86T29 641 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 LRRC6Q86X45 466 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 CLVS1Q8IUQ0 354 aaPredicted RBP6.17□□□□□ -1.42
RFX3-212ENST00000617270 CHPFQ8IZ52 775 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 USP38Q8NB14 1042 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 NIF3L1Q9GZT8 377 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 MRPS7Q9Y2R9 242 aaKnown RBP6.17□□□□□ -1.42
RFX3-212ENST00000617270 TDRKHQ9Y2W6 561 aaKnown RBP6.17□□□□□ -1.42
RFX3-212ENST00000617270 GRIN2AQ12879 1464 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 TBKBP1A7MCY6 615 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 IL18RAPO95256 599 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 BGNP21810 368 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 FDFT1P37268 417 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 KLK7P49862 253 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 CACNA2D1P54289 1103 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 PSMD4P55036 377 aaKnown RBP6.17□□□□□ -1.42
RFX3-212ENST00000617270 BIKQ13323 160 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 CAMK1Q14012 370 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 C2CD6Q53TS8 623 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 PDPK2PQ6A1A2 396 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 TIGD7Q6NT04 549 aaPredicted RBP6.17□□□□□ -1.42
RFX3-212ENST00000617270 LRRC74BQ6ZQY2 392 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 TSHZ1Q6ZSZ6 1077 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 METTL16Q86W50 562 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms